Literature DB >> 6330528

Structure of a human smooth muscle actin gene (aortic type) with a unique intron site.

H Ueyama, H Hamada, N Battula, T Kakunaga.   

Abstract

A recombinant phage containing an actin gene (lambda Ha201) was isolated from a human DNA library and the structure of the actin gene was determined. The amino acid sequences deduced from the nucleotide sequences of lambda Ha201 were compared with those of six actin isoforms; they matched those of bovine aortic smooth muscle actin, except for codon 309, which was valine (GTC) in lambda Ha201 and alanine (GCN) in bovine aortic smooth muscle actin. Southern blot hybridization experiments showed that the gene of normal human cells did not have the TaqI-sensitive site around position 309, whereas half of the genes of HUT14 cells did. These results indicate that one allele of the aortic smooth muscle actin gene in HUT14 cells has a transition point mutation (C----T) at codon 309 and that the amino acid sequences of normal human aorta and bovine smooth muscle actins are probably identical. In addition to the five introns interrupting exons at codons 150, 204, and 267, and between codons 41 and 42 and 327 and 328, which are common to skeletal muscle and cardiac muscle actin genes, the smooth muscle actin gene has two more intron sites between codons 84 and 85 and 121 and 122. The previously unreported intron site between codons 84 and 85 is unique to the smooth muscle actin gene. The intron site between codons 121 and 122 is common to beta-actin genes but is not found in other muscle actin genes. A hypothesis is proposed for the evolutionary pathway of the actin gene family.

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Year:  1984        PMID: 6330528      PMCID: PMC368875          DOI: 10.1128/mcb.4.6.1073-1078.1984

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  26 in total

1.  Detection of specific sequences among DNA fragments separated by gel electrophoresis.

Authors:  E M Southern
Journal:  J Mol Biol       Date:  1975-11-05       Impact factor: 5.469

2.  Unusual nucleotide sequences at the 5' end of actin genes in Dictyostelium discoideum.

Authors:  R A Firtel; R Timm; A R Kimmel; M McKeown
Journal:  Proc Natl Acad Sci U S A       Date:  1979-12       Impact factor: 11.205

3.  Screening lambdagt recombinant clones by hybridization to single plaques in situ.

Authors:  W D Benton; R W Davis
Journal:  Science       Date:  1977-04-08       Impact factor: 47.728

4.  Neoplastic transformation of human diploid fibroblast cells by chemical carcinogens.

Authors:  T Kakunaga
Journal:  Proc Natl Acad Sci U S A       Date:  1978-03       Impact factor: 11.205

5.  The isolation of structural genes from libraries of eucaryotic DNA.

Authors:  T Maniatis; R C Hardison; E Lacy; J Lauer; C O'Connell; D Quon; G K Sim; A Efstratiadis
Journal:  Cell       Date:  1978-10       Impact factor: 41.582

6.  Complete nucleotide sequence of a soybean actin gene.

Authors:  D M Shah; R C Hightower; R B Meagher
Journal:  Proc Natl Acad Sci U S A       Date:  1982-02       Impact factor: 11.205

7.  The isolation and characterization of linked delta- and beta-globin genes from a cloned library of human DNA.

Authors:  R M Lawn; E F Fritsch; R C Parker; G Blake; T Maniatis
Journal:  Cell       Date:  1978-12       Impact factor: 41.582

8.  Nucleotide sequence of the rat skeletal muscle actin gene.

Authors:  R Zakut; M Shani; D Givol; S Neuman; D Yaffe; U Nudel
Journal:  Nature       Date:  1982-08-26       Impact factor: 49.962

9.  The complete nucleotide sequence of the chick a-actin gene and its evolutionary relationship to the actin gene family.

Authors:  J A Fornwald; G Kuncio; I Peng; C P Ordahl
Journal:  Nucleic Acids Res       Date:  1982-07-10       Impact factor: 16.971

10.  Nucleotide sequence of the rightward operator of phage lambda.

Authors:  T Maniatis; A Jeffrey; D G Kleid
Journal:  Proc Natl Acad Sci U S A       Date:  1975-03       Impact factor: 11.205

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  36 in total

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Authors:  B Cresnar; W Mages; K Müller; J M Salbaum; R Schmitt
Journal:  Curr Genet       Date:  1990-11       Impact factor: 3.886

2.  Diverse soybean actin transcripts contain a large intron in the 5' untranslated leader: structural similarity to vertebrate muscle actin genes.

Authors:  L Pearson; R B Meagher
Journal:  Plant Mol Biol       Date:  1990-04       Impact factor: 4.076

3.  Structure, chromosome location, and expression of the human smooth muscle (enteric type) gamma-actin gene: evolution of six human actin genes.

Authors:  T Miwa; Y Manabe; K Kurokawa; S Kamada; N Kanda; G Bruns; H Ueyama; T Kakunaga
Journal:  Mol Cell Biol       Date:  1991-06       Impact factor: 4.272

4.  Cellular ras gene activity is required for full neoplastic transformation by polyomavirus.

Authors:  L Raptis; R Marcellus; M J Corbley; A Krook; J Whitfield; S K Anderson; T Haliotis
Journal:  J Virol       Date:  1991-10       Impact factor: 5.103

5.  AIDS-associated Kaposi's sarcoma-derived cells in long-term culture express and synthesize smooth muscle alpha-actin.

Authors:  H A Weich; S Z Salahuddin; P Gill; S Nakamura; R C Gallo; J Folkmann
Journal:  Am J Pathol       Date:  1991-12       Impact factor: 4.307

6.  Cross reaction of antibodies to a glycine/alanine repeat sequence of Epstein-Barr virus nuclear antigen-1 with collagen, cytokeratin, and actin.

Authors:  C Baboonian; P J Venables; D G Williams; R O Williams; R N Maini
Journal:  Ann Rheum Dis       Date:  1991-11       Impact factor: 19.103

7.  Structure of a processed gene of mouse cytoplasmic gamma-actin transposed into a BAM5 sequence: insertion has created 13 base-pair direct repeats.

Authors:  K Tokunaga; K Yoda; S Sakiyama
Journal:  Nucleic Acids Res       Date:  1985-05-10       Impact factor: 16.971

8.  Do exons code for structural or functional units in proteins?

Authors:  T W Traut
Journal:  Proc Natl Acad Sci U S A       Date:  1988-05       Impact factor: 11.205

9.  A putative ancestral actin gene present in a thermophilic eukaryote: novel combination of intron positions.

Authors:  A G Wildeman
Journal:  Nucleic Acids Res       Date:  1988-03-25       Impact factor: 16.971

10.  Six mouse alpha-tubulin mRNAs encode five distinct isotypes: testis-specific expression of two sister genes.

Authors:  A Villasante; D Wang; P Dobner; P Dolph; S A Lewis; N J Cowan
Journal:  Mol Cell Biol       Date:  1986-07       Impact factor: 4.272

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