Literature DB >> 6306567

Clustered repeat sequences in the genome of Epstein Barr virus.

M D Jones, B E Griffin.   

Abstract

The genome of Epstein-Barr virus is composed of unique DNA interspersed with repetitive sequences. This organization suggests that Epstein-Barr virus provides a useful model for studying the function(s) of repetitive sequences in eukaryotic chromosomes. The primary structure of two of the repeat sequences, the 3072 bp large internal repeat, or BamHI-W repeat, and a smaller 125 bp, G, C-rich NotI repeat, are presented here. Their structures and possible functions are discussed.

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Year:  1983        PMID： 6306567      PMCID： PMC326016          DOI： 10.1093/nar/11.12.3919

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


  40 in total

1.  Nucleotide sequences of the joint between the L and S segments of herpes simplex virus types 1 and 2.

Authors:  A J Davison; N M Wilkie
Journal:  J Gen Virol       Date:  1981-08       Impact factor: 3.891

2.  Epstein-Barr virus DNA. X. Direct repeat within the internal direct repeat of Epstein-Barr virus DNA.

Authors:  A Cheung; E Kieff
Journal:  J Virol       Date:  1981-11       Impact factor: 5.103

Review 3.  Molecular arrangement and evolution of heterochromatic DNA.

Authors:  D L Brutlag
Journal:  Annu Rev Genet       Date:  1980       Impact factor: 16.830

4.  Long internal direct repeat in Epstein-Barr virus DNA.

Authors:  A Cheung; E Kieff
Journal:  J Virol       Date:  1982-10       Impact factor: 5.103

5.  Repeated DNA still in search of a function.

Authors:  R Lewin
Journal:  Science       Date:  1982-08-13       Impact factor: 47.728

6.  The ovalbumin gene-sequence of putative control regions.

Authors:  C Benoist; K O'Hare; R Breathnach; P Chambon
Journal:  Nucleic Acids Res       Date:  1980-01-11       Impact factor: 16.971

7.  The structure and evolution of the human beta-globin gene family.

Authors:  A Efstratiadis; J W Posakony; T Maniatis; R M Lawn; C O'Connell; R A Spritz; J K DeRiel; B G Forget; S M Weissman; J L Slightom; A E Blechl; O Smithies; F E Baralle; C C Shoulders; N J Proudfoot
Journal:  Cell       Date:  1980-10       Impact factor: 41.582

8.  Comparison of Epstein-Barr virus strains of different origin by analysis of the viral DNAs.

Authors:  G W Bornkamm; H Delius; U Zimber; J Hudewentz; M A Epstein
Journal:  J Virol       Date:  1980-09       Impact factor: 5.103

9.  A system for shotgun DNA sequencing.

Authors:  J Messing; R Crea; P H Seeburg
Journal:  Nucleic Acids Res       Date:  1981-01-24       Impact factor: 16.971

10.  Detection of autonomous replicating sequences (ars) in the genome of Epstein-Barr virus.

Authors:  B E Henry; N J Raab-Traub; J S Pagano
Journal:  Proc Natl Acad Sci U S A       Date:  1983-02       Impact factor: 11.205
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  24 in total

1.  Size heterogeneity of EBV and mitochondrial DNAs in Burkitt's lymphoma lines.

Authors:  D Kinchington; B E Griffin
Journal:  Nucleic Acids Res       Date:  1987-12-23       Impact factor: 16.971

2.  Real-time Epstein-Barr virus PCR for the diagnosis of primary EBV infections and EBV reactivation.

Authors:  Rianne Luderer; Marieke Kok; Hubert G M Niesters; Rob Schuurman; Okke de Weerdt; Steven F T Thijsen
Journal:  Mol Diagn       Date:  2005

3.  The Epstein-Barr virus (EBV) ORI1yt enhancer is not B-cell specific and does not respond synergistically to the EBV transcription factors R and Z.

Authors:  H Gruffat; N Moreno; A Sergeant
Journal:  J Virol       Date:  1990-06       Impact factor: 5.103

4.  The Epstein-Barr virus (EBV) DR enhancer contains two functionally different domains: domain A is constitutive and cell specific, domain B is transactivated by the EBV early protein R.

Authors:  A Chevallier-Greco; H Gruffat; E Manet; A Calender; A Sergeant
Journal:  J Virol       Date:  1989-02       Impact factor: 5.103

5.  Sequences of the Epstein-Barr Virus (EBV) large internal repeat form the center of a 16-kilobase-pair palindrome of EBV (P3HR-1) heterogeneous DNA.

Authors:  H B Jenson; P J Farrell; G Miller
Journal:  J Virol       Date:  1987-05       Impact factor: 5.103

6.  Expression of a second Epstein-Barr virus-determined nuclear antigen in mouse cells after gene transfer with a cloned fragment of the viral genome.

Authors:  L Rymo; G Klein; A Ricksten
Journal:  Proc Natl Acad Sci U S A       Date:  1985-05       Impact factor: 11.205

7.  Coding and potential regulatory sequences of a cluster of chorion genes in Drosophila melanogaster.

Authors:  Y C Wong; J Pustell; N Spoerel; F C Kafatos
Journal:  Chromosoma       Date:  1985       Impact factor: 4.316

8.  Random association of Epstein-Barr virus genomes with host cell metaphase chromosomes in Burkitt's lymphoma-derived cell lines.

Authors:  A Harris; B D Young; B E Griffin
Journal:  J Virol       Date:  1985-10       Impact factor: 5.103

9.  Chorioretinal post-transplant lymphoproliferative disorder induced by the Epstein-Barr virus.

Authors:  P F Demols; P M Cochaux; T Velu; L Caspers-Velu
Journal:  Br J Ophthalmol       Date:  2001-01       Impact factor: 4.638

10.  Quantitative analysis of Epstein-Barr virus load by using a real-time PCR assay.

Authors:  H Kimura; M Morita; Y Yabuta; K Kuzushima; K Kato; S Kojima; T Matsuyama; T Morishima
Journal:  J Clin Microbiol       Date:  1999-01       Impact factor: 5.948
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