Literature DB >> 6304698

Biological expression of an Escherichia coli consensus sequence promoter and some mutant derivatives.

J J Rossi, X Soberon, Y Marumoto, J McMahon, K Itakura.   

Abstract

A prokaryotic consensus sequence promoter has been chemically synthesized and cloned in bacterial plasmid vectors. This designed sequence is biologically active and promotes efficient expression of the genes to which it is fused. It is an unusually strong promoter in vitro, capable of specifying multiple rounds of transcription even when there is a large molar excess of heparin present prior to the addition of RNA polymerase. These properties make this a useful sequence for the in vitro production of RNAs. A 2-base-pair spacer mutant and a -35 region transversion mutant have been created in vitro in the synthetic promoter by synthetic-DNA-mediated, site-specific mutagenesis. The spacer mutant has a marginal in vivo effect on promoter strength but virtually abolishes the in vitro heparin resistance. The -35 region transversion changes a highly conserved nucleotide into the statistically least preferred base. This mutation has no marked effect on in vivo or in vitro promoter strength.

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Year:  1983        PMID: 6304698      PMCID: PMC394008          DOI: 10.1073/pnas.80.11.3203

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  20 in total

1.  Nucleotide sequence of an RNA polymerase binding site at an early T7 promoter.

Authors:  D Pribnow
Journal:  Proc Natl Acad Sci U S A       Date:  1975-03       Impact factor: 11.205

2.  Chloramphenicol acetyltransferase from chloramphenicol-resistant bacteria.

Authors:  W V Shaw
Journal:  Methods Enzymol       Date:  1975       Impact factor: 1.600

3.  A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding.

Authors:  M M Bradford
Journal:  Anal Biochem       Date:  1976-05-07       Impact factor: 3.365

Review 4.  Regulatory sequences involved in the promotion and termination of RNA transcription.

Authors:  M Rosenberg; D Court
Journal:  Annu Rev Genet       Date:  1979       Impact factor: 16.830

5.  A computer aided oligonucleotide analysis provides a model sequence for RNA polymerase-promoter recognition in E.coli.

Authors:  G E Scherer; M D Walkinshaw; S Arnott
Journal:  Nucleic Acids Res       Date:  1978-10       Impact factor: 16.971

Review 6.  E. coli RNA polymerase interacts homologously with two different promoters.

Authors:  U Siebenlist; R B Simpson; W Gilbert
Journal:  Cell       Date:  1980-06       Impact factor: 41.582

7.  Characterization of promoter containing DNA fragments based on the abortive initiation reaction of Escherichia coli RNA polymerase.

Authors:  C L Cech; J Lichy; W R McClure
Journal:  J Biol Chem       Date:  1980-03-10       Impact factor: 5.157

8.  Hybridization of synthetic oligodeoxyribonucleotides to phi chi 174 DNA: the effect of single base pair mismatch.

Authors:  R B Wallace; J Shaffer; R F Murphy; J Bonner; T Hirose; K Itakura
Journal:  Nucleic Acids Res       Date:  1979-08-10       Impact factor: 16.971

9.  Construction and characterization of new cloning vehicles. IV. Deletion derivatives of pBR322 and pBR325.

Authors:  X Soberon; L Covarrubias; F Bolivar
Journal:  Gene       Date:  1980-05       Impact factor: 3.688

10.  Nucleotide sequence of an RNA polymerase binding site from the DNA of bacteriophage fd.

Authors:  H Schaller; C Gray; K Herrmann
Journal:  Proc Natl Acad Sci U S A       Date:  1975-02       Impact factor: 11.205

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  18 in total

1.  A novel method for promoter search enhanced by function-specific subgrouping of promoters--developed and tested on E.coli system.

Authors:  F Rozkot; P Sázelová; L Pivec
Journal:  Nucleic Acids Res       Date:  1989-06-26       Impact factor: 16.971

2.  Differential expression of gap and pgk genes within the gap operon of Zymomonas mobilis.

Authors:  C K Eddy; J P Mejia; T Conway; L O Ingram
Journal:  J Bacteriol       Date:  1989-12       Impact factor: 3.490

3.  Expression Vector for Zymomonas mobilis.

Authors:  T Conway; M O Byun; L O Ingram
Journal:  Appl Environ Microbiol       Date:  1987-02       Impact factor: 4.792

4.  Transcription in vivo directed by consensus sequences of E.coli promoters: their context heavily affects efficiencies and start sites.

Authors:  M A Jacquet; C Reiss
Journal:  Nucleic Acids Res       Date:  1990-03-11       Impact factor: 16.971

5.  Spacing of promoter elements regulates the basal expression of the soxS gene and converts SoxR from a transcriptional activator into a repressor.

Authors:  E Hidalgo; B Demple
Journal:  EMBO J       Date:  1997-03-03       Impact factor: 11.598

6.  Molecular cloning of an endoglucanase gene from an alkalophilic Bacillus sp. and its expression in Escherichia coli.

Authors:  J M Kim; I S Kong; J H Yu
Journal:  Appl Environ Microbiol       Date:  1987-11       Impact factor: 4.792

7.  In vitro splicing of simian virus 40 early pre mRNA.

Authors:  J C Noble; C Prives; J L Manley
Journal:  Nucleic Acids Res       Date:  1986-02-11       Impact factor: 16.971

8.  Protein export in Escherichia coli requires a soluble activity.

Authors:  M Müller; G Blobel
Journal:  Proc Natl Acad Sci U S A       Date:  1984-12       Impact factor: 11.205

9.  A partially functional 245-amino-acid internal deletion derivative of Escherichia coli sigma 70.

Authors:  A Kumar; H S Williamson; N Fujita; A Ishihama; R S Hayward
Journal:  J Bacteriol       Date:  1995-09       Impact factor: 3.490

10.  Introduction of restriction enzyme sites in protein-coding DNA sequences by site-specific mutagenesis not affecting the amino acid sequence: a computer program.

Authors:  R Arentzen; W C Ripka
Journal:  Nucleic Acids Res       Date:  1984-01-11       Impact factor: 16.971

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