Literature DB >> 629754

Biosynthesis of a hypermodified nucleotide in Saccharomyces carlsbergensis 17S and HeLa-cell 18S ribosomal ribonucleic acid.

R C Brand, J Klootwijk, R J Planta, B E Maden.   

Abstract

The biosynthesis of a hypermodified nucleotide, similar to or identical with 3-(3-amino-3-carboxypropyl)-1-methylpseudouridine monophosphate, present in Saccharomyces carlsbergensis 17S and HeLa-cell 18S rRNA, was investigated with respect to the sequence of reactions required for synthesis and their timing in ribosome maturation. In both yeast and HeLa cells methylation precedes attachment of the 3-amino-3-carboxypropyl group. In yeast the methylated precursor nucleotide was tentatively characterized as 1-methylpseudouridine. This precursor nucleotide was demonstrated in both 37S and most of the cytoplasmic 18S pre-rRNA (rRNA precursor) molecules. The synthesis of the hypermodified nucleotide is completed just before the final cleavage of 18S pre-rRNA to give 17S rRNA, so that the final addition of the 3-amino-3-carboxypropyl group is a cytoplasmic event. Comparable experiments with HeLa cells indicated that formation of 1-methylpseudouridine occurs at the level of 45S RNA and addition of the 3-amino-3-carboxypropyl group occurs in the cytoplasm on newly synthesized 18S RNA.

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Year:  1978        PMID: 629754      PMCID: PMC1184195          DOI: 10.1042/bj1690071

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  18 in total

1.  Ribosomal precursor particles from yeast.

Authors:  J Trapman; J Retèl; R J Planta
Journal:  Exp Cell Res       Date:  1975-01       Impact factor: 3.905

2.  Presence of a hypermodified nucleotide in HeLa cell 18 S and Saccharomyces carlsbergensis 17 S ribosomal RNAs.

Authors:  B E Maden; J Forbes; P de Jonge; J Klootwijk
Journal:  FEBS Lett       Date:  1975-11-01       Impact factor: 4.124

3.  The isolation from ribonucleic acid of substituted uridines containing alpha-aminobutyrate moieties derived from methionine.

Authors:  A G Saponara; M D Enger
Journal:  Biochim Biophys Acta       Date:  1974-04-27

4.  The methylated nucleotide sequences in HELA cell ribosomal RNA and its precursors.

Authors:  B E Maden; M Salim
Journal:  J Mol Biol       Date:  1974-09-05       Impact factor: 5.469

5.  Nucleotide sequences from specific areas of the 16S and 23S ribosomal RNAs of E. coli.

Authors:  P Fellner
Journal:  Eur J Biochem       Date:  1969-11

6.  The nucleotide sequences of some large ribonuclease T 1 products from bacteriophage R17 ribonucleic acid.

Authors:  P G Jeppesen
Journal:  Biochem J       Date:  1971-09       Impact factor: 3.857

7.  Incorporation of 14C from [2-14C]methionine into 18 s but not 28 s RNA of Chinese hamster cells.

Authors:  M D Enger; A G Saponara
Journal:  J Mol Biol       Date:  1968-04-14       Impact factor: 5.469

8.  Measurement of 32P activity in a liquid scintillation counter without the use of scintillator.

Authors:  T Clausen
Journal:  Anal Biochem       Date:  1968-01       Impact factor: 3.365

9.  Terminal nucleotide sequences of 17-S ribosomal RNA and its immediate precursor 18-S RNA in yeast.

Authors:  P De Jonge; J Klootwijk; R J Planta
Journal:  Eur J Biochem       Date:  1977-01

10.  Secondary methylation of yeast ribosomal precursor RNA.

Authors:  R C Brand; J Klootwijk; T J Van Steenbergen; A J De Kok; R J Planta
Journal:  Eur J Biochem       Date:  1977-05-02
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  30 in total

1.  The archaeal COG1901/DUF358 SPOUT-methyltransferase members, together with pseudouridine synthase Pus10, catalyze the formation of 1-methylpseudouridine at position 54 of tRNA.

Authors:  Kunal Chatterjee; Ian K Blaby; Patrick C Thiaville; Mrinmoyee Majumder; Henri Grosjean; Y Adam Yuan; Ramesh Gupta; Valérie de Crécy-Lagard
Journal:  RNA       Date:  2012-01-24       Impact factor: 4.942

2.  Loss of rRNA modifications in the decoding center of the ribosome impairs translation and strongly delays pre-rRNA processing.

Authors:  Xue-Hai Liang; Qing Liu; Maurille J Fournier
Journal:  RNA       Date:  2009-07-23       Impact factor: 4.942

Review 3.  Summary: the modified nucleosides of RNA.

Authors:  P A Limbach; P F Crain; J A McCloskey
Journal:  Nucleic Acids Res       Date:  1994-06-25       Impact factor: 16.971

4.  Ribosome biogenesis factor Tsr3 is the aminocarboxypropyl transferase responsible for 18S rRNA hypermodification in yeast and humans.

Authors:  Britta Meyer; Jan Philip Wurm; Sunny Sharma; Carina Immer; Denys Pogoryelov; Peter Kötter; Denis L J Lafontaine; Jens Wöhnert; Karl-Dieter Entian
Journal:  Nucleic Acids Res       Date:  2016-04-15       Impact factor: 16.971

5.  Fine structure of ribosomal RNA. II. Distribution of methylated sequences within Xenopus laevis rRNA.

Authors:  R C Brand; S A Gerbi
Journal:  Nucleic Acids Res       Date:  1979-11-24       Impact factor: 16.971

6.  Xenopus laevis 18S ribosomal RNA: experimental determination of secondary structural elements, and locations of methyl groups in the secondary structure model.

Authors:  J Atmadja; R Brimacombe; B E Maden
Journal:  Nucleic Acids Res       Date:  1984-03-26       Impact factor: 16.971

7.  A sequence from Drosophila melanogaster 18S rRNA bearing the conserved hypermodified nucleoside am psi: analysis by reverse transcription and high-performance liquid chromatography.

Authors:  D C Youvan; J E Hearst
Journal:  Nucleic Acids Res       Date:  1981-04-10       Impact factor: 16.971

8.  A single acetylation of 18 S rRNA is essential for biogenesis of the small ribosomal subunit in Saccharomyces cerevisiae.

Authors:  Satoshi Ito; Yu Akamatsu; Akiko Noma; Satoshi Kimura; Kenjyo Miyauchi; Yoshiho Ikeuchi; Takeo Suzuki; Tsutomu Suzuki
Journal:  J Biol Chem       Date:  2014-08-01       Impact factor: 5.157

9.  Synthesis and solution conformation studies of 3-substituted uridine and pseudouridine derivatives.

Authors:  Yu-Cheng Chang; Jayatilake Herath; Tony H-H Wang; Christine S Chow
Journal:  Bioorg Med Chem       Date:  2007-11-19       Impact factor: 3.641

10.  The ribosome assembly factor Nep1 responsible for Bowen-Conradi syndrome is a pseudouridine-N1-specific methyltransferase.

Authors:  Jan Philip Wurm; Britta Meyer; Ute Bahr; Martin Held; Olga Frolow; Peter Kötter; Joachim W Engels; Alexander Heckel; Michael Karas; Karl-Dieter Entian; Jens Wöhnert
Journal:  Nucleic Acids Res       Date:  2010-01-04       Impact factor: 16.971

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