Literature DB >> 6289265

Glutamate tRNA genes are adjacent to 5S RNA genes in Drosophila and reveal a conserved upstream sequence (the ACT-TA box).

Z K Indik, K D Tartof.   

Abstract

In Drosophila melanogaster at least six transfer RNA genes are located adjacent to the 3' end of the 5S RNA gene cluster. Three of these have been sequenced and identified as coding for glutamate tRNA4. In the chromosome they are arranged as tandem repeats on the same DNA strand and transcribed in the same direction as is 5S DNA, towards the centromere. We have also identified a sequence, the ACT-TA box, that is highly conserved among the polymerase III transcribed genes. Usually the sequence is located at 37 +/- 8 base pairs upstream from the first nucleotide of the structural gene. A similar sequence is also observed upstream of yeast and silkworm tRNA genes and the mitochondrial tRNA genes of mouse and humans.

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Year:  1982        PMID: 6289265      PMCID: PMC320790          DOI: 10.1093/nar/10.14.4159

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  38 in total

1.  Studies on the cleavage of bacteriophage lambda DNA with EcoRI Restriction endonuclease.

Authors:  M Thomas; R W Davis
Journal:  J Mol Biol       Date:  1975-01-25       Impact factor: 5.469

2.  Detection of specific sequences among DNA fragments separated by gel electrophoresis.

Authors:  E M Southern
Journal:  J Mol Biol       Date:  1975-11-05       Impact factor: 5.469

3.  Labeling deoxyribonucleic acid to high specific activity in vitro by nick translation with DNA polymerase I.

Authors:  P W Rigby; M Dieckmann; C Rhodes; P Berg
Journal:  J Mol Biol       Date:  1977-06-15       Impact factor: 5.469

4.  Hybridization of 125I-labeled ribonucleic acid.

Authors:  A Tereba; B J McCarthy
Journal:  Biochemistry       Date:  1973-11-06       Impact factor: 3.162

5.  Genetic analysis of the 5S RNA genes in Drosophila melanogaster.

Authors:  J D Procunier; K D Tartof
Journal:  Genetics       Date:  1975-11       Impact factor: 4.562

6.  A simple method for DNA restriction site mapping.

Authors:  H O Smith; M L Birnstiel
Journal:  Nucleic Acids Res       Date:  1976-09       Impact factor: 16.971

7.  A membrane-filter technique for the detection of complementary DNA.

Authors:  D T Denhardt
Journal:  Biochem Biophys Res Commun       Date:  1966-06-13       Impact factor: 3.575

8.  Localization of 5S RNA genes on Drosophila chromosomes by RNA-DNA hybridization.

Authors:  D E Wimber; D M Steffensen
Journal:  Science       Date:  1970-11-06       Impact factor: 47.728

9.  The 5S genes of Drosophila melanogaster.

Authors:  S Artavanis-Tsakonas; P Schedl; C Tschudi; V Pirrotta; R Steward; W J Gehring
Journal:  Cell       Date:  1977-12       Impact factor: 41.582

10.  Segmental aneuploidy and the genetic gross structure of the Drosophila genome.

Authors:  D L Lindsley; L Sandler; B S Baker; A T Carpenter; R E Denell; J C Hall; P A Jacobs; G L Miklos; B K Davis; R C Gethmann; R W Hardy; A H Steven; M Miller; H Nozawa; D M Parry; M Gould-Somero; M Gould-Somero
Journal:  Genetics       Date:  1972-05       Impact factor: 4.562

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  13 in total

1.  Compilation of tRNA sequences and sequences of tRNA genes.

Authors:  M Sprinzl; N Dank; S Nock; A Schön
Journal:  Nucleic Acids Res       Date:  1991-04-25       Impact factor: 16.971

2.  A human tRNAGlu gene of high transcriptional activity.

Authors:  J P Goddard; M Squire; M Bienz; J D Smith
Journal:  Nucleic Acids Res       Date:  1983-05-11       Impact factor: 16.971

3.  Using iodinated single-stranded M13 probes to facilitate rapid DNA sequence analysis--nucleotide sequence of a mouse lysine tRNA gene.

Authors:  J H Han; J D Harding
Journal:  Nucleic Acids Res       Date:  1983-04-11       Impact factor: 16.971

4.  Characterization and nucleotide sequence of a chicken gene encoding an opal suppressor tRNA and its flanking DNA segments.

Authors:  D L Hatfield; B S Dudock; F C Eden
Journal:  Proc Natl Acad Sci U S A       Date:  1983-08       Impact factor: 11.205

5.  An upstream signal is required for in vitro transcription of Neurospora 5S RNA genes.

Authors:  E U Selker; E Morzycka-Wroblewska; J N Stevens; R L Metzenberg
Journal:  Mol Gen Genet       Date:  1986-10

6.  Concerted evolution of dispersed Neurospora crassa 5S RNA genes: pattern of sequence conservation between allelic and nonallelic genes.

Authors:  E Morzycka-Wroblewska; E U Selker; J N Stevens; R L Metzenberg
Journal:  Mol Cell Biol       Date:  1985-01       Impact factor: 4.272

7.  The 5S ribosomal genes in the Drosophila melanogaster species subgroup. Nucleotide sequence of a 5S unit from Drosophila simulans and Drosophila teissieri.

Authors:  M L Samson; M Wegnez
Journal:  Nucleic Acids Res       Date:  1984-01-25       Impact factor: 16.971

8.  Structure and evolution of a mouse tRNA gene cluster encoding tRNAAsp, tRNAGly and tRNAGlu and an unlinked, solitary gene encoding tRNAAsp.

Authors:  J E Looney; J D Harding
Journal:  Nucleic Acids Res       Date:  1983-12-20       Impact factor: 16.971

9.  Transcriptionally active and inactive gene repeats within the D. melanogaster 5S RNA gene cluster.

Authors:  S Sharp; A Garcia; L Cooley; D Söll
Journal:  Nucleic Acids Res       Date:  1984-10-25       Impact factor: 16.971

10.  Intimate association of 5S RNA and tRNA genes in Drosophila melanogaster.

Authors:  R DeLotto; C Louis; M Wormington; P Schedl
Journal:  Mol Gen Genet       Date:  1982
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