Literature DB >> 6288132

Electrostatic modeling of ion pores. Energy barriers and electric field profiles.

P C Jordan.   

Abstract

This paper presents calculations of the image potential for an ion in an aqueous pore through lipid membrane and the electric field produced in such a pore when a transmembrane potential is applied. The method used is one introduced by Levitt (1978, Biophys. J. 22:209), who solved an equivalent problem, in which a surface charge density is placed at the dielectric boundary. It is shown that there are singularities in this surface charge density if the model system has sharp corners. Numerically accurate calculations require exact treatment of these singularities. The major result of this paper is the development of a projection method that explicitly accounts for this behavior. It is shown how this technique can be used to compute, both reliably and efficiently, the electrical potential within a model pore in response to any electrical source. As the length of a channel with fixed radius is increased, the peak in the image potential approaches that of an infinitely long channel more rapidly than previously believed. When a transmembrane potential is applied the electric field within a pore is constant over most of its length. Unless the channel is much longer than its radius, the field extends well into the aqueous domain. For sufficiently dissimilar dielectrics the calculated values for the peak in the image potential and for the field well within the pore can be summarized by simple empirical expressions that are accurate to within 5%.

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Year:  1982        PMID: 6288132      PMCID: PMC1328927          DOI: 10.1016/S0006-3495(82)84503-7

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  7 in total

1.  Ion-membrane interactions as structural forces.

Authors:  V A Parsegian
Journal:  Ann N Y Acad Sci       Date:  1975-12-30       Impact factor: 5.691

2.  Ionic selectivity of pores formed by the matrix protein (porin) of Escherichia coli.

Authors:  R Benz; K Janko; P Läuger
Journal:  Biochim Biophys Acta       Date:  1979-03-08

3.  Formation of large, ion-permeable membrane channels by the matrix protein (porin) of Escherichia coli.

Authors:  R Benz; K Janko; W Boos; P Läuger
Journal:  Biochim Biophys Acta       Date:  1978-08-17

4.  Energy of an ion crossing a low dielectric membrane: solutions to four relevant electrostatic problems.

Authors:  A Parsegian
Journal:  Nature       Date:  1969-03-01       Impact factor: 49.962

5.  The gramicidin A transmembrane channel: a proposed pi(L,D) helix.

Authors:  D W Urry
Journal:  Proc Natl Acad Sci U S A       Date:  1971-03       Impact factor: 11.205

6.  Energy barriers for passage of ions through channels. Exact solution of two electrostatic problems.

Authors:  P C Jordan
Journal:  Biophys Chem       Date:  1981-06       Impact factor: 2.352

7.  Electrostatic calculations for an ion channel. I. Energy and potential profiles and interactions between ions.

Authors:  D G Levitt
Journal:  Biophys J       Date:  1978-05       Impact factor: 4.033

  7 in total
  48 in total

1.  Permeation of ions across the potassium channel: Brownian dynamics studies.

Authors:  S H Chung; T W Allen; M Hoyles; S Kuyucak
Journal:  Biophys J       Date:  1999-11       Impact factor: 4.033

2.  A combined molecular dynamics and diffusion model of single proton conduction through gramicidin.

Authors:  M F Schumaker; R Pomès; B Roux
Journal:  Biophys J       Date:  2000-12       Impact factor: 4.033

3.  Functional properties of threefold and fourfold channels in ferritin deduced from electrostatic calculations.

Authors:  Takuya Takahashi; Serdar Kuyucak
Journal:  Biophys J       Date:  2003-04       Impact factor: 4.033

4.  Role of the dielectric constants of membrane proteins and channel water in ion permeation.

Authors:  Turgut Baştuğ; Serdar Kuyucak
Journal:  Biophys J       Date:  2003-05       Impact factor: 4.033

5.  Electrostatic influence on ion transport through the alphaHL channel.

Authors:  M Misakian; J J Kasianowicz
Journal:  J Membr Biol       Date:  2003-10-01       Impact factor: 1.843

6.  Gauging of the PhoE channel by a single freely diffusing proton.

Authors:  Sharron Bransburg-Zabary; Esther Nachliel; Menachem Gutman
Journal:  Biophys J       Date:  2002-12       Impact factor: 4.033

7.  Constant fields and constant gradients in open ionic channels.

Authors:  D P Chen; V Barcilon; R S Eisenberg
Journal:  Biophys J       Date:  1992-05       Impact factor: 4.033

8.  Continuum electrostatics fails to describe ion permeation in the gramicidin channel.

Authors:  Scott Edwards; Ben Corry; Serdar Kuyucak; Shin-Ho Chung
Journal:  Biophys J       Date:  2002-09       Impact factor: 4.033

9.  The role of Trp side chains in tuning single proton conduction through gramicidin channels.

Authors:  Joseph A Gowen; Jeffrey C Markham; Sara E Morrison; Timothy A Cross; David D Busath; Eric J Mapes; Mark F Schumaker
Journal:  Biophys J       Date:  2002-08       Impact factor: 4.033

10.  Selectivity and permeation in calcium release channel of cardiac muscle: alkali metal ions.

Authors:  D P Chen; L Xu; A Tripathy; G Meissner; B Eisenberg
Journal:  Biophys J       Date:  1999-03       Impact factor: 4.033

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