Literature DB >> 6285999

Protein conformation from electron spin relaxation data.

J P Allen, J T Colvin, D G Stinson, C P Flynn, H J Stapleton.   

Abstract

Electron spin relaxation data from five ferric proteins are analyzed in terms of the fractal model of protein structures. Details of this model are presented. The results lead to a characterization of protein structures by a single parameter, the fractal dimension, d. This structural parameter is shown to determine the temperature dependence of the Raman electron spin relaxation rate, which varies as T3 + 2d. Computations of d are made using x-ray data for 17 proteins. The results range from d = 1.76 for lysozyme to d = 1.34 for ferredoxin. These values are compared with values of d obtained from the present electron spin relaxation data on five ferric proteins. Typical results are d = 1.34 +/- 0.06 from relaxation data and 1.34 +/- 0.05 from x-ray data for ferredoxin; d = 1.67 +/- 0.03 from relaxation data and 1.66 +/- 0.05 from x-ray data for ferricytochrome c. The data thus support the theoretical model. Applications of this spin resonance technique to the study of changes in protein conformation are discussed.

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Year:  1982        PMID: 6285999      PMCID: PMC1328872          DOI: 10.1016/S0006-3495(82)84562-1

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  21 in total

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Journal:  J Biol Chem       Date:  1973-06-10       Impact factor: 5.157

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Authors:  D O Lambeth; K L Campbell; R Zand; G Palmer
Journal:  J Biol Chem       Date:  1973-12-10       Impact factor: 5.157

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Authors:  R A Morton; T L Bohan
Journal:  Can J Biochem       Date:  1971-03

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Authors:  T Yonetani; H Schleyer
Journal:  J Biol Chem       Date:  1967-09-10       Impact factor: 5.157

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Authors:  D M Segal; C H Cohen; D R Davies; J C Powers; P E Wilcox
Journal:  Cold Spring Harb Symp Quant Biol       Date:  1972

6.  The structure of cytochrome b 5 at 2.0 Angstrom resolution.

Authors:  F S Mathews; P Argos; M Levine
Journal:  Cold Spring Harb Symp Quant Biol       Date:  1972

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Authors:  J J Birktoft; D M Blow
Journal:  J Mol Biol       Date:  1972-07-21       Impact factor: 5.469

8.  A magnetic resonance study of sperm whale ferrimyoglobin and its complex with 1 cupric ion.

Authors:  F R Gurd; K E Falk; B G Malmström; T Vänngård
Journal:  J Biol Chem       Date:  1967-12-25       Impact factor: 5.157

9.  Structure of papain.

Authors:  J Drenth; J N Jansonius; R Koekoek; H M Swen; B G Wolthers
Journal:  Nature       Date:  1968-06-08       Impact factor: 49.962

Review 10.  Carboxypeptidase A: a protein and an enzyme.

Authors:  F A Quiocho; W N Lipscomb
Journal:  Adv Protein Chem       Date:  1971
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  14 in total

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Authors:  Jean-Pierre Korb; Robert G Bryant
Journal:  Biophys J       Date:  2005-07-22       Impact factor: 4.033

2.  Structural diversity of protein segments follows a power-law distribution.

Authors:  Yoshito Sawada; Shinya Honda
Journal:  Biophys J       Date:  2006-05-26       Impact factor: 4.033

3.  My daily constitutional in martinsried.

Authors:  James P Allen
Journal:  Photosynth Res       Date:  2004       Impact factor: 3.573

4.  Electron spin relaxation measurements on the blue-copper protein plastocyanin: Deviations from a power law temperature dependence.

Authors:  A R Drews; B D Thayer; H J Stapleton; G C Wagner; G Giugliarelli; S Cannistraro
Journal:  Biophys J       Date:  1990-01       Impact factor: 4.033

5.  Fractal mechanisms for the allosteric effects of proteins and enzymes.

Authors:  H Q Li; S H Chen; H M Zhao
Journal:  Biophys J       Date:  1990-11       Impact factor: 4.033

Review 6.  Fractal symmetry of protein interior: what have we learned?

Authors:  Anirban Banerji; Indira Ghosh
Journal:  Cell Mol Life Sci       Date:  2011-05-26       Impact factor: 9.261

7.  Temperature dependence of the low frequency dynamics of myoglobin. Measurement of the vibrational frequency distribution by inelastic neutron scattering.

Authors:  S Cusack; W Doster
Journal:  Biophys J       Date:  1990-07       Impact factor: 4.033

8.  Electron-electron spin-spin interaction in spin-labeled low-spin methemoglobin.

Authors:  V Budker; J L Du; M Seiter; G R Eaton; S S Eaton
Journal:  Biophys J       Date:  1995-06       Impact factor: 4.033

9.  Electron paramagnetic resonance of the excited triplet state of metal-free and metal-substituted cytochrome c.

Authors:  P J Angiolillo; J M Vanderkooi
Journal:  Biophys J       Date:  1995-06       Impact factor: 4.033

10.  Temperature dependence of the electron spin-lattice relaxation rate from pulsed EPR of CUA and heme a in cytochrome c oxidase.

Authors:  C P Scholes; R Janakiraman; H Taylor; T E King
Journal:  Biophys J       Date:  1984-05       Impact factor: 4.033

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