Literature DB >> 6285649

[Mathematical modelling of glycolysis and adenine nucleotide metabolism of human erythrocytes. I. Reaction-kinetic statements, analysis of in vivo state and determination of starting conditions for in vitro experiments].

M Schauer, R Heinrich, S M Rapoport.   

Abstract

A mathematical model of energy metabolism of human red cells is presented, which includes besides the glycolytic reactions the adenine nucleotide metabolism. The model is based on the network of chemical reactions, the thermodynamic equilibrium constants of fast reversible reactions and on the kinetic equations for irreversible enzyme reactions. The model consists of a system of 16 differential equations and allows the mathematical evaluation of metabolic levels in the steady state of energy metabolism corresponding to the in vivo state erythrocytes with the kinetic data for the enzymes derived from in vitro experiments. The dependence of the levels of metabolites in the steady state on the activity of some enzymes is analysed to characterize the regulatory properties of the system. The comparison of the steady state levels of the model with experimental data makes it possible to estimate values of some controversial enzyme parameters. Estimates of the kinetic parameters of the following intracellular processes are presented: 1) rate constant of AMP-phosphatase, 2) maximum rate of adenylate deaminase, 3) activity of adenine phosphoribosylpyrophosphate transferase and 4) adenosine transport through the cell membrane. The simulation of the preparatory phase before incubation of erythrocytes indicates, that the model also permits to compute the time course of changes of levels of metabolites. To solve the initial problem the stiff differential equation system is integrated numerically by an efficient program without the application of the quasi-steady-state approximation.

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Year:  1981        PMID: 6285649

Source DB:  PubMed          Journal:  Acta Biol Med Ger        ISSN: 0001-5318


  8 in total

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2.  Determination of Flux Control Coefficients from transient metabolite concentrations.

Authors:  J Delgado; J C Liao
Journal:  Biochem J       Date:  1992-03-15       Impact factor: 3.857

Review 3.  Towards the engineering of in vitro systems.

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4.  A theoretical approach to the evolution and structural design of enzymatic networks: linear enzymatic chains, branched pathways and glycolysis of erythrocytes.

Authors:  R Heinrich; H G Holzhütter; S Schuster
Journal:  Bull Math Biol       Date:  1987       Impact factor: 1.758

5.  iAB-RBC-283: A proteomically derived knowledge-base of erythrocyte metabolism that can be used to simulate its physiological and patho-physiological states.

Authors:  Aarash Bordbar; Neema Jamshidi; Bernhard O Palsson
Journal:  BMC Syst Biol       Date:  2011-07-12

6.  In silico model-driven assessment of the effects of single nucleotide polymorphisms (SNPs) on human red blood cell metabolism.

Authors:  Neema Jamshidi; Sharon J Wiback; Bernhard Ø Palsson B
Journal:  Genome Res       Date:  2002-11       Impact factor: 9.043

Review 7.  Metabolomics in transfusion medicine.

Authors:  Travis Nemkov; Kirk C Hansen; Larry J Dumont; Angelo D'Alessandro
Journal:  Transfusion       Date:  2015-12-12       Impact factor: 3.157

8.  Dynamic simulation of red blood cell metabolism and its application to the analysis of a pathological condition.

Authors:  Yoichi Nakayama; Ayako Kinoshita; Masaru Tomita
Journal:  Theor Biol Med Model       Date:  2005-05-09       Impact factor: 2.432

  8 in total

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