Literature DB >> 6278415

Is DNA unwound by the cyclic AMP receptor protein?

A Kolb, H Buc.   

Abstract

Superhelical pBR 322 derivatives have been relaxed by eukaryotic topoisomerase I in the presence or in the absence of E. coli cyclic AMP receptor protein (CRP) and of cyclic AMP (cAMP). CRP alone, or cAMP alone do not affect the average linking number of the distribution of the relaxed topoisomers. Hence, they do not unwind the template. In the presence of cAMP, CRP induces a small unwinding. The extent of this unwinding is barely modified when the relaxation is carried out on a similar vector plasmid where the CRP binding site of the lac or of the gal operon has been inserted. Under these conditions, we checked that CRP occupies the lactose control site and that upon addition of RNA polymerase, the corresponding promoter is readily activated. These findings are difficult to reconcile with the proposal that activation of these promoters results from the binding of the CRP-cAMP complex to left-handed DNA sequences.

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Year:  1982        PMID: 6278415      PMCID: PMC326151          DOI: 10.1093/nar/10.2.473

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  27 in total

1.  Specific binding of CAP factor to lac promoter DNA.

Authors:  J Majors
Journal:  Nature       Date:  1975-08-21       Impact factor: 49.962

2.  Genetic regulation: the Lac control region.

Authors:  R C Dickson; J Abelson; W M Barnes; W S Reznikoff
Journal:  Science       Date:  1975-01-10       Impact factor: 47.728

3.  Polynucleotide kinase exchange reaction: quantitave assay for restriction endonuclease-generated 5'-phosphoroyl termini in DNA.

Authors:  K L Berkner; W R Folk
Journal:  J Biol Chem       Date:  1977-05-25       Impact factor: 5.157

4.  Folding of the DNA double helix in chromatin-like structures from simian virus 40.

Authors:  J E Germond; B Hirt; P Oudet; M Gross-Bellark; P Chambon
Journal:  Proc Natl Acad Sci U S A       Date:  1975-05       Impact factor: 11.205

5.  Conformational fluctuations of DNA helix.

Authors:  D E Depew; J C Wang
Journal:  Proc Natl Acad Sci U S A       Date:  1975-11       Impact factor: 11.205

6.  The problems of eukaryotic and prokaryotic DNA packaging and in vivo conformation posed by superhelix density heterogeneity.

Authors:  M Shure; D E Pulleyblank; J Vinograd
Journal:  Nucleic Acids Res       Date:  1977       Impact factor: 16.971

7.  Effect of DNA length on the free energy of binding of an unwinding ligand to a supercoiled DNA.

Authors:  N Davidson
Journal:  J Mol Biol       Date:  1972-05-14       Impact factor: 5.469

8.  Determination of the number of superhelical turns in simian virus 40 DNA by gel electrophoresis.

Authors:  W Keller
Journal:  Proc Natl Acad Sci U S A       Date:  1975-12       Impact factor: 11.205

9.  Physiochemical studies on interactions between DNA and RNA polymerase. Unwinding of the DNA helix by Escherichia coli RNA polymerase.

Authors:  J C Wang; J H Jacobsen; J M Saucier
Journal:  Nucleic Acids Res       Date:  1977       Impact factor: 16.971

10.  Contacts between the lac repressor and the thymines in the lac operator.

Authors:  R Ogata; W Gilbert
Journal:  Proc Natl Acad Sci U S A       Date:  1977-11       Impact factor: 11.205

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  27 in total

1.  Genome wide, supercoiling-dependent in vivo binding of a viral protein involved in DNA replication and transcriptional control.

Authors:  Víctor González-Huici; Margarita Salas; José M Hermoso
Journal:  Nucleic Acids Res       Date:  2004-04-26       Impact factor: 16.971

Review 2.  Protein-induced DNA linking number change by sequence-specific DNA binding proteins and its biological effects.

Authors:  Fenfei Leng
Journal:  Biophys Rev       Date:  2016-06-10

Review 3.  Protein-induced DNA linking number change by sequence-specific DNA binding proteins and its biological effects.

Authors:  Fenfei Leng
Journal:  Biophys Rev       Date:  2016-11-14

4.  The helical repeat of underwound DNA in solution.

Authors:  S M Richardson; T C Boles; N R Cozzarelli
Journal:  Nucleic Acids Res       Date:  1988-07-25       Impact factor: 16.971

5.  Binding of the cyclic AMP receptor protein of Escherichia coli to RNA polymerase.

Authors:  M Pinkney; J G Hoggett
Journal:  Biochem J       Date:  1988-03-15       Impact factor: 3.857

6.  Selectivity of the Escherichia coli RNA polymerase E sigma 38 for overlapping promoters and ability to support CRP activation.

Authors:  A Kolb; D Kotlarz; S Kusano; A Ishihama
Journal:  Nucleic Acids Res       Date:  1995-03-11       Impact factor: 16.971

7.  H1a, an E. coli DNA-binding protein which accumulates in stationary phase, strongly compacts DNA in vitro.

Authors:  A Spassky; S Rimsky; H Garreau; H Buc
Journal:  Nucleic Acids Res       Date:  1984-07-11       Impact factor: 16.971

8.  Model of specific complex between catabolite gene activator protein and B-DNA suggested by electrostatic complementarity.

Authors:  I T Weber; T A Steitz
Journal:  Proc Natl Acad Sci U S A       Date:  1984-07       Impact factor: 11.205

9.  DNA unwinding ability of Xenopus transcription factor A.

Authors:  J S Hanas; D F Bogenhagen; C W Wu
Journal:  Nucleic Acids Res       Date:  1984-01-25       Impact factor: 16.971

10.  DNA linking number change induced by sequence-specific DNA-binding proteins.

Authors:  Bo Chen; Yazhong Xiao; Chang Liu; Chenzhong Li; Fenfei Leng
Journal:  Nucleic Acids Res       Date:  2010-02-25       Impact factor: 16.971

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