Literature DB >> 6276178

Kinetic studies of proton transfer in the microenvironment of a binding site.

M Gutman, D Huppert, E Nachliel.   

Abstract

Excitation of 8-hydroxypyrene 1,3,6-trisulfonate to its first electronic singlet state converts the compound from weak base (pK degrees = 7.7) into a strong acid (pK* = 0.5). The dissociation of the proton in water or dilute salt solution is a very fast reaction, K12 = 1 X 10(10) S-1. In concentrated salt solutions the dissociation is slowed as an exponential function of the chemical activity of the water in the solution. This kinetic parameter has been used to gauge the properties of the microenvironment of the binding sites of bovine serum albumin at which this compound is bound. Time-resolved fluorometry reveals two distinct steps: a rapid dissociation of the proton with tau = 300 +/- 40 ps which lasts approximately 0.5 ns, followed by a slower reaction with tau = 3.3 ns. The first rapid phase represents proton dissociation taking place in the binding site. From the rate constant K = 3.3 X 10(9) s-1 we estimate that the ability of the water molecules in the site to hydrate the ejected proton is equivalent to a salt solution with water activity of 0.85. The slow phase represents the escape of the proton from the binding site. The rate of the escape, 1.4 X 10(8) s-1, is significantly slower than diffusion-controlled dissociation. It is concluded that the shape of the site or its lowered proton conductivity do not allow a rapid escape of the proton to the bulk. Still it should be remembered that the escape of the proton is 10(5)-10(6)-times faster than a typical turnover of an enzyme.U

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Year:  1982        PMID: 6276178     DOI: 10.1111/j.1432-1033.1982.tb05833.x

Source DB:  PubMed          Journal:  Eur J Biochem        ISSN: 0014-2956


  8 in total

1.  Gauging of the PhoE channel by a single freely diffusing proton.

Authors:  Sharron Bransburg-Zabary; Esther Nachliel; Menachem Gutman
Journal:  Biophys J       Date:  2002-12       Impact factor: 4.033

2.  Molecular dynamics of a protein surface: ion-residues interactions.

Authors:  Ran Friedman; Esther Nachliel; Menachem Gutman
Journal:  Biophys J       Date:  2005-05-13       Impact factor: 4.033

3.  Protein surface dynamics: interaction with water and small solutes.

Authors:  Ran Friedman; Esther Nachliel; Menachem Gutman
Journal:  J Biol Phys       Date:  2005-12       Impact factor: 1.365

4.  Time-resolved study of the inner space of lactose permease.

Authors:  E Nachliel; N Pollak; D Huppert; M Gutman
Journal:  Biophys J       Date:  2001-03       Impact factor: 4.033

5.  Solvent-Slaved Dynamic Processes Observed by Tryptophan Phosphorescence of Human Serum Albumin.

Authors:  Andrew R Draganski; Joel M Friedman; Richard D Ludescher
Journal:  Biophys J       Date:  2017-03-14       Impact factor: 4.033

6.  Proton transfer dynamics in the nonhomogeneous electric field of a protein.

Authors:  R Yam; E Nachliel; S Kiryati; M Gutman; D Huppert
Journal:  Biophys J       Date:  1991-01       Impact factor: 4.033

7.  Reverse micelles as a tool for probing solvent modulation of protein dynamics: Reverse micelle encapsulated hemoglobin.

Authors:  Camille J Roche; David Dantsker; Elizabeth R Heller; Joseph E Sabat; Joel M Friedman
Journal:  Chem Phys       Date:  2013-08-30       Impact factor: 2.348

8.  The Dual Use of the Pyranine (HPTS) Fluorescent Probe: A Ground-State pH Indicator and an Excited-State Proton Transfer Probe.

Authors:  Ramesh Nandi; Nadav Amdursky
Journal:  Acc Chem Res       Date:  2022-09-02       Impact factor: 24.466

  8 in total

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