Literature DB >> 6273859

Coordination environment of the active-site metal ion of liver alcohol dehydrogenase.

M W Makinen, M B Yim.   

Abstract

The coordination environment of the catalytically active metal ion of horse liver alcohol dehydrogenase (alcohol:NAD+ oxidoreductase, EC 1.1.1.1) has been investigated by electron paramagnetic resonance (EPR) methods with use of the active-site-specific Co2+-reconstituted enzyme. The EPR absorption spectrum of the metal-substituted enzyme is characteristic of a rhombically distorted environment. The spectrum of the enzyme--NAD+ complex shows approximate axial symmetry of the metal ion site, indicating that binding of the coenzyme induces a structural alteration in the active-site region. This environment is not significantly altered further by binding of the competitive inhibitor pyrazole. To assign the coordination number of the active-site metal ion, the zero-field splitting was determined on the basis of the temperature dependence of the spin--lattice relaxation of the Co2+ ion. The zero-field splitting energies are approximately 9 cm-1 for the free Co2+-reconstituted enzyme and approximately 46 and approximately 47 cm-1 for the enzyme--NAD+ and enzyme--NAD+--pyrazole complex, respectively. On the basis of studies of structurally defined small molecule complexes, these values are compatible with a tetracoordinate metal ion in the active site of the free enzyme but a pentacoordinate metal ion in the binary enzyme--NAD+ complex and in the ternary enzyme--NAD+--inhibitor complex and, therefore, presumably also in the catalytically active ternary enzyme--NAD+--alcohol complex formed in the course of alcohol oxidation.

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Year:  1981        PMID: 6273859      PMCID: PMC349010          DOI: 10.1073/pnas.78.10.6221

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  19 in total

1.  pH, isotope, and substituent effects on the interconversion of aromatic substrates catalyzed by hydroxybutyrimidylated liver alcohol dehydrogenase.

Authors:  R T Dworschack; B V Plapp
Journal:  Biochemistry       Date:  1977-06-14       Impact factor: 3.162

2.  Similarities in active center geometries of zinc-containing enzymes, proteases and dehydrogenases.

Authors:  P Argos; R M Garavito; W Eventoff; M G Rossmann; C I Brändén
Journal:  J Mol Biol       Date:  1978-12-05       Impact factor: 5.469

3.  PRODUCT INHIBITION STUDIES ON YEAST AND LIVER ALCOHOL DEHYDROGENASES.

Authors:  C C WRATTEN; W W CLELAND
Journal:  Biochemistry       Date:  1963 Sep-Oct       Impact factor: 3.162

4.  An electron spin resonance study of high spin forms of cobalt(II) bovine carbonic anhydrase.

Authors:  A Desideri; L Morpurgo; J B Raynor; G Rotilio
Journal:  Biophys Chem       Date:  1978-09       Impact factor: 2.352

5.  Nuclear magnetic resonance studies of substrate interaction with cobalt substituted alcohol dehydrogenase from liver.

Authors:  D L Sloan; J M Young; A S Mildvan
Journal:  Biochemistry       Date:  1975-05-06       Impact factor: 3.162

6.  The transient state kinetics of horse liver alcohol dehydrogenase.

Authors:  H Theorell; K Tatemoto
Journal:  Acta Chem Scand       Date:  1970

7.  X-ray investigation of the binding of 1,10-phenanthroline and imidazole to horse-liver alcohol dehydrogenase.

Authors:  T Boiwe; C I Bränden
Journal:  Eur J Biochem       Date:  1977-07-01

8.  Structure of a triclinic ternary complex of horse liver alcohol dehydrogenase at 2.9 A resolution.

Authors:  H Eklund; J P Samma; L Wallén; C I Brändén; A Akeson; T A Jones
Journal:  J Mol Biol       Date:  1981-03-15       Impact factor: 5.469

9.  Structural and electronic mimics of the active site of cobalt(II)-substituted zinc metalloenzymes.

Authors:  W D Horrocks; J N Ishley; B Holmquist; J S Thompson
Journal:  J Inorg Biochem       Date:  1980-04       Impact factor: 4.155

10.  Heterotopic brain in the nasopharynx and soft palate: report of two cases.

Authors:  H A Zarem; G F Gray; D Morehead; M T Edgerton
Journal:  Surgery       Date:  1967-03       Impact factor: 3.982

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  9 in total

1.  The coordination of the catalytic zinc in alcohol dehydrogenase studied by combined quantum-chemical and molecular mechanics calculations.

Authors:  U Ryde
Journal:  J Comput Aided Mol Des       Date:  1996-04       Impact factor: 3.686

2.  Inhibition of the dapE-Encoded N-Succinyl-L,L-diaminopimelic Acid Desuccinylase from Neisseria meningitidis by L-Captopril.

Authors:  Anna Starus; Boguslaw Nocek; Brian Bennett; James A Larrabee; Daniel L Shaw; Wisath Sae-Lee; Marie T Russo; Danuta M Gillner; Magdalena Makowska-Grzyska; Andrzej Joachimiak; Richard C Holz
Journal:  Biochemistry       Date:  2015-08-03       Impact factor: 3.162

3.  A hyperactive cobalt-substituted extradiol-cleaving catechol dioxygenase.

Authors:  Andrew J Fielding; Elena G Kovaleva; Erik R Farquhar; John D Lipscomb; Lawrence Que
Journal:  J Biol Inorg Chem       Date:  2010-12-14       Impact factor: 3.358

4.  The influence of anions and inhibitors on the catalytic metal ion in Co(II)-substituted horse liver alcohol dehydrogenase.

Authors:  I Bertini; G Lanini; C Luchinat; C Haas; W Maret; M Zeppezauer
Journal:  Eur Biophys J       Date:  1987       Impact factor: 1.733

5.  Crystal structures of the active site in specifically metal-depleted and cobalt-substituted horse liver alcohol dehydrogenase derivatives.

Authors:  G Schneider; H Eklund; E Cedergren-Zeppezauer; M Zeppezauer
Journal:  Proc Natl Acad Sci U S A       Date:  1983-09       Impact factor: 11.205

6.  Purification, substrate range, and metal center of AtzC: the N-isopropylammelide aminohydrolase involved in bacterial atrazine metabolism.

Authors:  Nir Shapir; Jeffrey P Osborne; Gilbert Johnson; Michael J Sadowsky; Lawrence P Wackett
Journal:  J Bacteriol       Date:  2002-10       Impact factor: 3.490

7.  Neutral metal-bound water is the base catalyst in liver alcohol dehydrogenase.

Authors:  M W Makinen; W Maret; M B Yim
Journal:  Proc Natl Acad Sci U S A       Date:  1983-05       Impact factor: 11.205

8.  Horse Liver Alcohol Dehydrogenase: Zinc Coordination and Catalysis.

Authors:  Bryce V Plapp; Baskar Raj Savarimuthu; Daniel J Ferraro; Jon K Rubach; Eric N Brown; S Ramaswamy
Journal:  Biochemistry       Date:  2017-07-07       Impact factor: 3.162

9.  Active site dynamics in the zinc-dependent medium chain alcohol dehydrogenase superfamily.

Authors:  Patrick J Baker; K Linda Britton; Martin Fisher; Julia Esclapez; Carmen Pire; Maria Jose Bonete; Juan Ferrer; David W Rice
Journal:  Proc Natl Acad Sci U S A       Date:  2009-01-08       Impact factor: 11.205

  9 in total

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