Literature DB >> 6273798

Interspersed repeated sequences in the African green monkey genome that are homologous to the human Alu family.

G Grimaldi, C Queen, M F Singer.   

Abstract

The dominant family of interspersed repetitive DNA sequences in the human genome has been termed the Alu family. We have found that more than 75% of the lambda phage in a recombinant library representing an African green monkey genome hybridize with a human Alu sequence under stringent conditions. A group of clones selected from the monkey library with probes other than the Alu sequence were analyzed for the presence and distribution of Alu family sequences. The analyses confirm the abundance of Alu sequences and demonstrate that more than one repeat unit is present in some phages. In the clones studied, the Alu units are separated by an average of 8 kilobase pairs of unrelated sequences. The nucleotide sequence of one monkey Alu sequence is reported and shown to resemble the human Alu sequences closely. Hence, the sequence, dispersion pattern, and copy number of the Alu family members are very similar in the African green monkey and human genomes. Among the clones investigated were two that contain segments of the satellite DNA term alpha-component joined to non alpha-component DNA. The experiments indicate that in the monkey genome Alu sequences can occur close to regions of alpha-component DNA.

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Year:  1981        PMID: 6273798      PMCID: PMC327543          DOI: 10.1093/nar/9.21.5553

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  44 in total

1.  The Chinese hamster Alu-equivalent sequence: a conserved highly repetitious, interspersed deoxyribonucleic acid sequence in mammals has a structure suggestive of a transposable element.

Authors:  S R Haynes; T P Toomey; L Leinwand; W R Jelinek
Journal:  Mol Cell Biol       Date:  1981-07       Impact factor: 4.272

2.  Repeated sequences in DNA. Hundreds of thousands of copies of DNA sequences have been incorporated into the genomes of higher organisms.

Authors:  R J Britten; D E Kohne
Journal:  Science       Date:  1968-08-09       Impact factor: 47.728

3.  General interspersion of repetitive with non-repetitive sequence elements in the DNA of Xenopus.

Authors:  E H Davidson; B R Hough; C S Amenson; R J Britten
Journal:  J Mol Biol       Date:  1973-06-15       Impact factor: 5.469

4.  Recurring defective variants of simian virus 40 containing monkey DNA segments.

Authors:  J Papamatheakis; T N Lee; R E Thayer; M F Singer
Journal:  J Virol       Date:  1981-01       Impact factor: 5.103

Review 5.  Gene conversion: some implications for immunoglobulin genes.

Authors:  D Baltimore
Journal:  Cell       Date:  1981-06       Impact factor: 41.582

6.  Structural analysis of interspersed repetitive polymerase III transcription units in human DNA.

Authors:  J Pan; J T Elder; C H Duncan; S M Weissman
Journal:  Nucleic Acids Res       Date:  1981-03-11       Impact factor: 16.971

7.  DNA strand reassociation and polyribonucleotide binding in the African green monkey, Cercopithecus aethiops.

Authors:  J J Maio
Journal:  J Mol Biol       Date:  1971-03-28       Impact factor: 5.469

8.  Gene conversion between duplicated genetic elements in yeast.

Authors:  J A Jackson; G R Fink
Journal:  Nature       Date:  1981-07-23       Impact factor: 49.962

9.  DNA sequences similar to those around the simian virus 40 origin of replication are present in the monkey genome.

Authors:  T F McCutchan; M F Singer
Journal:  Proc Natl Acad Sci U S A       Date:  1981-01       Impact factor: 11.205

10.  The evolution of a family of short interspersed repeats in primate DNA.

Authors:  C M Houck; C W Schmid
Journal:  J Mol Evol       Date:  1981       Impact factor: 2.395

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  24 in total

1.  Transfer RNA-like structure of the human Alu family: implications of its generation mechanism and possible functions.

Authors:  N Okada
Journal:  J Mol Evol       Date:  1990-12       Impact factor: 2.395

2.  Insertion of an Alu SINE in the human homologue of the Mlvi-2 locus.

Authors:  A Economou-Pachnis; P N Tsichlis
Journal:  Nucleic Acids Res       Date:  1985-12-09       Impact factor: 16.971

Review 3.  Structure and function of repetitive DNA in eukaryotes.

Authors:  N Hardman
Journal:  Biochem J       Date:  1986-02-15       Impact factor: 3.857

4.  A transcriptionally active monkey genomic segment homologous to the regulatory region of simian virus 40 is associated with DNase I-hypersensitive sites.

Authors:  S T Lord; M F Singer
Journal:  Mol Cell Biol       Date:  1984-08       Impact factor: 4.272

5.  The distribution of interspersed repeats is nonuniform and conserved in the mouse and human genomes.

Authors:  P Soriano; M Meunier-Rotival; G Bernardi
Journal:  Proc Natl Acad Sci U S A       Date:  1983-04       Impact factor: 11.205

6.  Ruminant globin gene structures suggest an evolutionary role for Alu-type repeats.

Authors:  J C Schimenti; C H Duncan
Journal:  Nucleic Acids Res       Date:  1984-02-10       Impact factor: 16.971

7.  Human U1 RNA pseudogenes may be generated by both DNA- and RNA-mediated mechanisms.

Authors:  R A Denison; A M Weiner
Journal:  Mol Cell Biol       Date:  1982-07       Impact factor: 4.272

8.  Ubiquitous transposon-like repeats B1 and B2 of the mouse genome: B2 sequencing.

Authors:  A S Krayev; T V Markusheva; D A Kramerov; A P Ryskov; K G Skryabin; A A Bayev; G P Georgiev
Journal:  Nucleic Acids Res       Date:  1982-12-11       Impact factor: 16.971

9.  KpnI families of long, interspersed repetitive DNAs in human and other primate genomes.

Authors:  B Shafit-Zagardo; J J Maio; F L Brown
Journal:  Nucleic Acids Res       Date:  1982-05-25       Impact factor: 16.971

10.  Recombination and deletion of sequences in shuttle vector plasmids in mammalian cells.

Authors:  S Chakrabarti; S Joffe; M M Seidman
Journal:  Mol Cell Biol       Date:  1985-09       Impact factor: 4.272

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