Literature DB >> 6270661

Site-specific interaction of DNA gyrase with DNA.

L M Fisher, K Mizuuchi, M H O'Dea, H Ohmori, M Gellert.   

Abstract

DNA gyrase, in the presence of the inhibitor oxolinic acid, can induce double-strand DNA breakage at specific sites. The sequences at several sites have been determined. In addition, the structure of complexes formed between DNA gyrase and restriction fragments containing an oxolinic acid-promoted cleavage site has been examined by DNase protection methods. DNA gyrase protects more than 120 base pairs of DNA against pancreatic DNase in a region surrounding the cleavage site. Protection is observed both in the presence and absence of oxolinic acid. Protected DNA flanking the cleavage site contains DNase I-sensitive sites spaced on the average 10 or 11 base pairs apart. This result supports the view that, in the DNA gyrase--DNA complex, the DNA is largely wrapped on the outside of the enzyme.

Entities:  

Mesh:

Substances:

Year:  1981        PMID: 6270661      PMCID: PMC319749          DOI: 10.1073/pnas.78.7.4165

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  22 in total

1.  DNA-DNA gyrase complex: the wrapping of the DNA duplex outside the enzyme.

Authors:  L F Liu; J C Wang
Journal:  Cell       Date:  1978-11       Impact factor: 41.582

2.  DNA gyrase and DNA supercoiling.

Authors:  M Gellert; K Mizuuchi; M H O'Dea; H Ohmori; J Tomizawa
Journal:  Cold Spring Harb Symp Quant Biol       Date:  1979

3.  DNAse footprinting: a simple method for the detection of protein-DNA binding specificity.

Authors:  D J Galas; A Schmitz
Journal:  Nucleic Acids Res       Date:  1978-09       Impact factor: 16.971

4.  Mechanism of action of nalidixic acid: purification of Escherichia coli nalA gene product and its relationship to DNA gyrase and a novel nicking-closing enzyme.

Authors:  A Sugino; C L Peebles; K N Kreuzer; N R Cozzarelli
Journal:  Proc Natl Acad Sci U S A       Date:  1977-11       Impact factor: 11.205

5.  A new method for sequencing DNA.

Authors:  A M Maxam; W Gilbert
Journal:  Proc Natl Acad Sci U S A       Date:  1977-02       Impact factor: 11.205

6.  Complete nucleotide sequence of the Escherichia coli plasmid pBR322.

Authors:  J G Sutcliffe
Journal:  Cold Spring Harb Symp Quant Biol       Date:  1979

7.  Site-specific cleavage of DNA by E. coli DNA gyrase.

Authors:  A Morrison; N R Cozzarelli
Journal:  Cell       Date:  1979-05       Impact factor: 41.582

8.  Origin of replication of colicin E1 plasmid DNA.

Authors:  J I Tomizawa; H Ohmori; R E Bird
Journal:  Proc Natl Acad Sci U S A       Date:  1977-05       Impact factor: 11.205

9.  Nalidixic acid resistance: a second genetic character involved in DNA gyrase activity.

Authors:  M Gellert; K Mizuuchi; M H O'Dea; T Itoh; J I Tomizawa
Journal:  Proc Natl Acad Sci U S A       Date:  1977-11       Impact factor: 11.205

10.  Micrococcus luteus DNA gyrase: active components and a model for its supercoiling of DNA.

Authors:  L F Liu; J C Wang
Journal:  Proc Natl Acad Sci U S A       Date:  1978-05       Impact factor: 11.205

View more
  67 in total

1.  A model for the mechanism of strand passage by DNA gyrase.

Authors:  S C Kampranis; A D Bates; A Maxwell
Journal:  Proc Natl Acad Sci U S A       Date:  1999-07-20       Impact factor: 11.205

2.  The cleavage of DNA at phosphorothioate internucleotidic linkages by DNA gyrase.

Authors:  S T Dobbs; P M Cullis; A Maxwell
Journal:  Nucleic Acids Res       Date:  1992-07-25       Impact factor: 16.971

3.  The C-terminal domain of DNA gyrase A adopts a DNA-bending beta-pinwheel fold.

Authors:  Kevin D Corbett; Ryan K Shultzaberger; James M Berger
Journal:  Proc Natl Acad Sci U S A       Date:  2004-05-03       Impact factor: 11.205

4.  Computational analysis of DNA gyrase action.

Authors:  Alexander Vologodskii
Journal:  Biophys J       Date:  2004-08-31       Impact factor: 4.033

5.  Crystal structures of DNA-Whirly complexes and their role in Arabidopsis organelle genome repair.

Authors:  Laurent Cappadocia; Alexandre Maréchal; Jean-Sébastien Parent; Etienne Lepage; Jurgen Sygusch; Normand Brisson
Journal:  Plant Cell       Date:  2010-06-15       Impact factor: 11.277

6.  Novel gyrase mutations in quinolone-resistant and -hypersusceptible clinical isolates of Mycobacterium tuberculosis: functional analysis of mutant enzymes.

Authors:  Alexandra Aubry; Nicolas Veziris; Emmanuelle Cambau; Chantal Truffot-Pernot; Vincent Jarlier; L Mark Fisher
Journal:  Antimicrob Agents Chemother       Date:  2006-01       Impact factor: 5.191

7.  DNA gyrase can cleave short DNA fragments in the presence of quinolone drugs.

Authors:  M E Cove; A P Tingey; A Maxwell
Journal:  Nucleic Acids Res       Date:  1997-07-15       Impact factor: 16.971

8.  The C-terminal domain of the Escherichia coli DNA gyrase A subunit is a DNA-binding protein.

Authors:  R J Reece; A Maxwell
Journal:  Nucleic Acids Res       Date:  1991-04-11       Impact factor: 16.971

Review 9.  In front of and behind the replication fork: bacterial type IIA topoisomerases.

Authors:  Claudia Sissi; Manlio Palumbo
Journal:  Cell Mol Life Sci       Date:  2010-02-18       Impact factor: 9.261

10.  Quinolone resistance mutations in Streptococcus pneumoniae GyrA and ParC proteins: mechanistic insights into quinolone action from enzymatic analysis, intracellular levels, and phenotypes of wild-type and mutant proteins.

Authors:  X S Pan; G Yague; L M Fisher
Journal:  Antimicrob Agents Chemother       Date:  2001-11       Impact factor: 5.191

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.