Literature DB >> 6254058

Construction of a composite tRNA gene by anticodon loop transplant.

M Yarus, C McMillan, S Cline, D Bradley, M Snyder.   

Abstract

By using sites for the restriction nuclease Hpa II, the information for the anticodon stem and loop of an altered Su+2 amber suppressor tRNA (a mutant of tRNAGln) has been transplanted to a specially prepared tRNATrp gene, which lacks it homologous anticodon stem and loop sequence. The resulting tRNA gene was cloned under lac operator-promoter control. The result is a functional, hybrid, amber-suppressor tRNA that can exhibit a moderately high efficiency in translation. It appears less efficient, however, than Su+7 tRNA, the amber suppressor that results from a direct anticodon mutation in tRNATrp. As judged by its suppressor spectrum, which is almost identical to the spectra of Su+2, and Su+7, the recomposed tRNA inserts glutamine at amber sites. This experiment is the prototype of a series of construction that examine the role of the nucleotides in the anticodon region.

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Year:  1980        PMID: 6254058      PMCID: PMC350002          DOI: 10.1073/pnas.77.9.5092

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  29 in total

1.  Oligonucleotide sequences of RNase T 1 and pancreatic RNase digests of E. coli aspartic acid tRNA.

Authors:  F Harada; K Yamaizumi; S Nishimura
Journal:  Biochem Biophys Res Commun       Date:  1972-12-18       Impact factor: 3.575

2.  Amino acid substitutions resulting from suppression of nonsense mutations. II. Glutamine insertion by the Su-2 gene; tyrosine insertion by the Su-3 gene.

Authors:  M G Weigert; E Lanka; A Garen
Journal:  J Mol Biol       Date:  1965-12       Impact factor: 5.469

3.  Tryptophan transfer RNA as the UGA suppressor.

Authors:  D Hirsh
Journal:  J Mol Biol       Date:  1971-06-14       Impact factor: 5.469

4.  Ribosomal mutations affecting efficiency of amber suppression.

Authors:  P Strigini; L Gorini
Journal:  J Mol Biol       Date:  1970-02-14       Impact factor: 5.469

5.  Release factors mediating termination of complete proteins.

Authors:  M R Capecchi; H A Klein
Journal:  Nature       Date:  1970-06-13       Impact factor: 49.962

6.  Effect of Sul gene dosage on the production of suppressed alkaline phosphatase in Escherichia coli K12.

Authors:  E P Hoffman; R C Wilhelm
Journal:  J Mol Biol       Date:  1970-04-14       Impact factor: 5.469

7.  Mutants that make more lac repressor.

Authors:  B Müller-Hill; L Crapo; W Gilbert
Journal:  Proc Natl Acad Sci U S A       Date:  1968-04       Impact factor: 11.205

8.  Recessive lethal nonsense suppressor in Escherichia coli which inserts glutamine.

Authors:  L Soll; P Berg
Journal:  Nature       Date:  1969-09-27       Impact factor: 49.962

9.  Nonsense codons and polarity in the tryptophan operon.

Authors:  C Yanofsky; J Ito
Journal:  J Mol Biol       Date:  1966-11-14       Impact factor: 5.469

10.  Amber suppressors: efficiency of chain propagation and suppressor specific amino acids.

Authors:  S Kaplan; A O Stretton; S Brenner
Journal:  J Mol Biol       Date:  1965-12       Impact factor: 5.469

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  20 in total

1.  Regulation of the Escherichia coli tna operon: nascent leader peptide control at the tnaC stop codon.

Authors:  K V Konan; C Yanofsky
Journal:  J Bacteriol       Date:  1997-03       Impact factor: 3.490

2.  Decoding with the A:I wobble pair is inefficient.

Authors:  J F Curran
Journal:  Nucleic Acids Res       Date:  1995-02-25       Impact factor: 16.971

3.  tRNA(2Gln) mutants that translate the CGA arginine codon as glutamine in Escherichia coli.

Authors:  F Tsai; J F Curran
Journal:  RNA       Date:  1998-12       Impact factor: 4.942

Review 4.  Transfer ribonucleic acid-mediated suppression of termination codons in Escherichia coli.

Authors:  G Eggertsson; D Söll
Journal:  Microbiol Rev       Date:  1988-09

5.  The bases of the tRNA anticodon loop are independent by genetic criteria.

Authors:  D Smith; L Breeden; E Farrell; M Yarus
Journal:  Nucleic Acids Res       Date:  1987-06-11       Impact factor: 16.971

6.  Functional interactions in vivo between suppressor tRNA and mutationally altered ribosomal protein S4.

Authors:  L A Kirsebom; L A Isaksson
Journal:  Mol Gen Genet       Date:  1986-11

7.  Complete set of orthogonal 21st aminoacyl-tRNA synthetase-amber, ochre and opal suppressor tRNA pairs: concomitant suppression of three different termination codons in an mRNA in mammalian cells.

Authors:  Caroline Köhrer; Eric L Sullivan; Uttam L RajBhandary
Journal:  Nucleic Acids Res       Date:  2004-12-01       Impact factor: 16.971

8.  Defined set of cloned termination suppressors: in vivo activity of isogenetic UAG, UAA, and UGA suppressor tRNAs.

Authors:  L A Raftery; J B Egan; S W Cline; M Yarus
Journal:  J Bacteriol       Date:  1984-06       Impact factor: 3.490

9.  Apparent lack of discrimination in the reading of certain codons in Mycoplasma mycoides.

Authors:  T Samuelsson; Y S Guindy; F Lustig; T Borén; U Lagerkvist
Journal:  Proc Natl Acad Sci U S A       Date:  1987-05       Impact factor: 11.205

10.  Mutants of Escherichia coli initiator tRNA that suppress amber codons in Saccharomyces cerevisiae and are aminoacylated with tyrosine by yeast extracts.

Authors:  C P Lee; U L RajBhandary
Journal:  Proc Natl Acad Sci U S A       Date:  1991-12-15       Impact factor: 11.205

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