Literature DB >> 6246488

Supercoils in prokaryotic DNA restrained in vivo.

D E Pettijohn, O Pfenninger.   

Abstract

Cells of Escherichia coli containing the plasmid F were gamma-irradiated with various doses to introduce determined numbers of single-strand breaks in the F DNA. The cells were then incubated to permit repair of the breaks while DNA gyrase was inhibited with coumermycin to limit restoration of any relaxed supercoil. Repaired, covalently continuous F DNA was isolated and its superhelical density was measured by two different methods. Both indicated that a major part (50-60%) of the negative superhelical turns were maintained in the repaired molecules, suggesting that the supercoils are restrained in vivo.

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Year:  1980        PMID: 6246488      PMCID: PMC348488          DOI: 10.1073/pnas.77.3.1331

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  30 in total

1.  Transcription in vitro of DNA in isolated bacterial nucleoids.

Authors:  R Giorno; T Stamato; B Lydersen; D Pettijohn
Journal:  J Mol Biol       Date:  1975-08-05       Impact factor: 5.469

2.  On the degree of unwinding of the DNA helix by ethidium. II. Studies by electron microscopy.

Authors:  L F Liu; J C Wang
Journal:  Biochim Biophys Acta       Date:  1975-07-23

3.  Properties of a membrane-attached form of the folded chromosome of Escherichia coli.

Authors:  A Worcel; E Burgi
Journal:  J Mol Biol       Date:  1974-01-05       Impact factor: 5.469

4.  On the structure of the folded chromosome of Escherichia coli.

Authors:  A Worcel; E Burgi
Journal:  J Mol Biol       Date:  1972-11-14       Impact factor: 5.469

5.  A buoyant method for the determination of the superhelix density of closed circular DNA.

Authors:  H B Gray; W B Upholt; J Vinograd
Journal:  J Mol Biol       Date:  1971-11-28       Impact factor: 5.469

6.  Supercoiling of polyoma virus DNA measured by its interaction with ethidium bromide.

Authors:  L V Crawford; M J Waring
Journal:  J Mol Biol       Date:  1967-04-14       Impact factor: 5.469

7.  Degree of superhelicity of covalently closed cyclic DNA's from Escherichia coli.

Authors:  J C Wang
Journal:  J Mol Biol       Date:  1969-07-28       Impact factor: 5.469

8.  Characterization of a novel, low-molecular-weight DNA-binding protein from Escherichia coli.

Authors:  J Rouvière-Yaniv; F Gros
Journal:  Proc Natl Acad Sci U S A       Date:  1975-09       Impact factor: 11.205

9.  Template activities of the phi X-174 replicative allomorphic deoxyribonucleic acids.

Authors:  Y Hayashi; M Hayashi
Journal:  Biochemistry       Date:  1971-11       Impact factor: 3.162

10.  The use of an ethidium analogue in the dye-buoyant density procedure for the isolation of closed circular DNA: the variation of the superhelix density of mitochondrial DNA.

Authors:  B Hudson; W B Upholt; J Devinny; J Vinograd
Journal:  Proc Natl Acad Sci U S A       Date:  1969-03       Impact factor: 11.205

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  47 in total

Review 1.  Chromosome partitioning in Escherichia coli.

Authors:  A Løbner-Olesen; P L Kuempel
Journal:  J Bacteriol       Date:  1992-12       Impact factor: 3.490

2.  Coralline shape of the bacterial nucleoid after cryofixation.

Authors:  B Bohrmann; W Villiger; R Johansen; E Kellenberger
Journal:  J Bacteriol       Date:  1991-05       Impact factor: 3.490

3.  Measuring chromosome dynamics on different time scales using resolvases with varying half-lives.

Authors:  Richard A Stein; Shuang Deng; N Patrick Higgins
Journal:  Mol Microbiol       Date:  2005-05       Impact factor: 3.501

4.  Modeling the Lac repressor-operator assembly: the influence of DNA looping on Lac repressor conformation.

Authors:  David Swigon; Bernard D Coleman; Wilma K Olson
Journal:  Proc Natl Acad Sci U S A       Date:  2006-06-19       Impact factor: 11.205

Review 5.  The bacterial nucleoid revisited.

Authors:  C Robinow; E Kellenberger
Journal:  Microbiol Rev       Date:  1994-06

6.  Why is the initiation nick site of an AT-rich rolling circle plasmid at the tip of a GC-rich cruciform?

Authors:  R Jin; M E Fernandez-Beros; R P Novick
Journal:  EMBO J       Date:  1997-07-16       Impact factor: 11.598

7.  How topoisomerase IV can efficiently unknot and decatenate negatively supercoiled DNA molecules without causing their torsional relaxation.

Authors:  Eric J Rawdon; Julien Dorier; Dusan Racko; Kenneth C Millett; Andrzej Stasiak
Journal:  Nucleic Acids Res       Date:  2016-04-22       Impact factor: 16.971

Review 8.  Histonelike proteins of bacteria.

Authors:  K Drlica; J Rouviere-Yaniv
Journal:  Microbiol Rev       Date:  1987-09

9.  DNA supercoiling in gyrase mutants.

Authors:  T R Steck; G J Pruss; S H Manes; L Burg; K Drlica
Journal:  J Bacteriol       Date:  1984-05       Impact factor: 3.490

10.  Binding of phage Phi29 architectural protein p6 to the viral genome: evidence for topological restriction of the phage linear DNA.

Authors:  Víctor González-Huici; Martín Alcorlo; Margarita Salas; José M Hermoso
Journal:  Nucleic Acids Res       Date:  2004-07-01       Impact factor: 16.971

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