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Literature DB >> 6194507

Isolation and characterization of two linked mouse U1b small nuclear RNA genes.

W F Marzluff, D T Brown, S Lobo, S S Wang.

Abstract

A 6.9 kilobase Eco R1 fragment containing genes for two U1 RNAs has been isolated from a library of mouse DNA. The two genes code for an RNA which is very similar, if not identical, to mouse U1b RNA as judged by S1 nuclease mapping. This RNA is one base longer than the mouse U1a RNA, human U1 RNA, and rat U1 RNA and differs in six nucleotide substitutions from rat U1 RNA. The two genes are five kilobases apart and the U1 RNAs are coded for on opposite strands of the DNA with the 5' ends juxtaposed. The sequences flanking the genes are identical for 700 bases 5' to the gene and at least 80 bases 3' to the gene.

Entities: Gene Species

Mesh：

Substances：

Year: 1983 PMID： 6194507 PMCID： PMC326371 DOI： 10.1093/nar/11.18.6255

Source DB: PubMed Journal: Nucleic Acids Res ISSN： 0305-1048 Impact factor: 16.971

35 in total

1. Construction and characterization of amplifiable multicopy DNA cloning vehicles derived from the P15A cryptic miniplasmid.

Authors: A C Chang; S N Cohen
Journal: J Bacteriol Date: 1978-06 Impact factor: 3.490

2. Detection of specific sequences among DNA fragments separated by gel electrophoresis.

Authors: E M Southern
Journal: J Mol Biol Date: 1975-11-05 Impact factor: 5.469

3. Nucleotide sequence of U-2 ribonucleic acid. The sequence of the 5'-terminal oligonucleotide.

Authors: T S Ro-Choi; Y C Choi; D Henning; J McCloskey; H Busch
Journal: J Biol Chem Date: 1975-05-25 Impact factor: 5.157

4. Sizing and mapping of early adenovirus mRNAs by gel electrophoresis of S1 endonuclease-digested hybrids.

Authors: A J Berk; P A Sharp
Journal: Cell Date: 1977-11 Impact factor: 41.582

5. The organization of the histone genes in Drosophila melanogaster: functional and evolutionary implications.

Authors: R P Lifton; M L Goldberg; R W Karp; D S Hogness
Journal: Cold Spring Harb Symp Quant Biol Date: 1978

6. A new method for sequencing DNA.

Authors: A M Maxam; W Gilbert
Journal: Proc Natl Acad Sci U S A Date: 1977-02 Impact factor: 11.205

7. Purification and characterization of adenosine triphosphate: ribonucleic acid adenyltransferase from Escherichia coli.

Authors: A E Sippel
Journal: Eur J Biochem Date: 1973-08-01

8. UV shadowing--a new and convenient method for the location of ultraviolet-absorbing species in polyacrylamide gels.

Authors: S M Hassur; H W Whitlock
Journal: Anal Biochem Date: 1974-05 Impact factor: 3.365

9. Small molecular weight monodisperse nuclear RNA.

Authors: R A Weinberg; S Penman
Journal: J Mol Biol Date: 1968-12 Impact factor: 5.469

10. Low molecular weight RNA species from chromatin.

Authors: W F Marzluff; E L White; R Benjamin; R C Huang
Journal: Biochemistry Date: 1975-08-12 Impact factor: 3.162

38 in total

1. The histone mRNA 3' end is required for localization of histone mRNA to polyribosomes.

Authors: J Sun; D R Pilch; W F Marzluff
Journal: Nucleic Acids Res Date: 1992-11-25 Impact factor: 16.971

2. Genomic organization and comparative chromosome mapping of the U1 snRNA gene in cichlid fish, with an emphasis in Oreochromis niloticus.

Authors: D C Cabral-de-Mello; G T Valente; R T Nakajima; C Martins
Journal: Chromosome Res Date: 2012-01-11 Impact factor: 5.239

6. Synthesis of U1 RNA in isolated nuclei from sea urchin embryos: U1 RNA is initiated at the first nucleotide of the RNA.

Authors: G F Morris; W F Marzluff
Journal: Mol Cell Biol Date: 1985-05 Impact factor: 4.272

Isolation and characterization of two linked mouse U1b small nuclear RNA genes.

1. Construction and characterization of amplifiable multicopy DNA cloning vehicles derived from the P15A cryptic miniplasmid.

2. Detection of specific sequences among DNA fragments separated by gel electrophoresis.

3. Nucleotide sequence of U-2 ribonucleic acid. The sequence of the 5'-terminal oligonucleotide.

4. Sizing and mapping of early adenovirus mRNAs by gel electrophoresis of S1 endonuclease-digested hybrids.

5. The organization of the histone genes in Drosophila melanogaster: functional and evolutionary implications.

6. A new method for sequencing DNA.

7. Purification and characterization of adenosine triphosphate: ribonucleic acid adenyltransferase from Escherichia coli.

8. UV shadowing--a new and convenient method for the location of ultraviolet-absorbing species in polyacrylamide gels.

9. Small molecular weight monodisperse nuclear RNA.

10. Low molecular weight RNA species from chromatin.

1. The histone mRNA 3' end is required for localization of histone mRNA to polyribosomes.

2. Genomic organization and comparative chromosome mapping of the U1 snRNA gene in cichlid fish, with an emphasis in Oreochromis niloticus.

3. Expression of histone-U1 snRNA chimeric genes: U1 promoters are compatible with histone 3' end formation.

4. Compilation of small RNA sequences.

5. Increasing the distance between the snRNA promoter and the 3' box decreases the efficiency of snRNA 3'-end formation.

6. Synthesis of U1 RNA in isolated nuclei from sea urchin embryos: U1 RNA is initiated at the first nucleotide of the RNA.

7. Structure of the sea urchin U1 RNA repeat.

8. Compilation of small RNA sequences.

9. Sequences of four mouse histone H3 genes: implications for evolution of mouse histone genes.

10. The two embryonic U1 small nuclear RNAs of Xenopus laevis are encoded by a major family of tandemly repeated genes.