Literature DB >> 6194100

Eukaryotic DNA methylation.

D N Cooper.   

Abstract

Eukaryotic genomes contain 5-methylcytosine (5mC) as a rare base.5mC arises by postsynthetic modification of cytosine and occurs, at least in animals, predominantly in the dinucleotide CpG. The base is not distributed randomly in these genomes but conforms to a pattern. This pattern varies between taxa but appears to be inherited in a semi-conservative fashion. At the level of the genome, gross changes in the level of DNA methylation have been noted. This has encouraged speculation that the modification may play a role in cellular differentiation. Tissue-specific patterns of DNA methylation, predicted by various models of differentiation, have been found for most vertebrate genes so far examined. A correlation has emerged between the undermethylation of these regions and their transcription, but this is not always the case. While data for eukaryotic viral sequences are less equivocal, studies of this kind cannot in isolation distinguish between undermethylation being a cause or a consequence of gene activity. If it were a cause, it is probable that the demethylation of specific CpG sites would be a necessary yet not a sufficient condition for transcription to occur. The introduction of artificially methylated DNA sequences into individual eukaryotic cells by microinjection or transformation may provide the means to elucidate these questions in the future. In the meantime, the study of eukaryotic DNA methylation promises to contribute much to our understanding of the regulation of gene expression in these organisms.

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Year:  1983        PMID: 6194100     DOI: 10.1007/bf00292363

Source DB:  PubMed          Journal:  Hum Genet        ISSN: 0340-6717            Impact factor:   4.132


  251 in total

1.  Phenotypic switching in cells transformed with the herpes simplex virus thymidine kinase gene.

Authors:  M Ostrander; S Vogel; S Silverstein
Journal:  Mol Cell Biol       Date:  1982-06       Impact factor: 4.272

2.  Enzymatic synthesis of deoxyribonucleic acid. VIII. Frequencies of nearest neighbor base sequences in deoxyribonucleic acid.

Authors:  J JOSSE; A D KAISER; A KORNBERG
Journal:  J Biol Chem       Date:  1961-03       Impact factor: 5.157

3.  Chromosomal subunits in active genes have an altered conformation.

Authors:  H Weintraub; M Groudine
Journal:  Science       Date:  1976-09-03       Impact factor: 47.728

4.  Methylation of Lilium DNA during the meiotic cycle.

Authors:  Y Hotta; N Hecht
Journal:  Biochim Biophys Acta       Date:  1971-04-29

5.  Methylation of the viral genome in an in vitro model of herpes simplex virus latency.

Authors:  H Youssoufian; S M Hammer; M S Hirsch; C Mulder
Journal:  Proc Natl Acad Sci U S A       Date:  1982-04       Impact factor: 11.205

6.  De novo methylation and expression of retroviral genomes during mouse embryogenesis.

Authors:  D Jähner; H Stuhlmann; C L Stewart; K Harbers; J Löhler; I Simon; R Jaenisch
Journal:  Nature       Date:  1982-08-12       Impact factor: 49.962

7.  DNA methylase from HeLa cell nuclei.

Authors:  P H Roy; A Weissbach
Journal:  Nucleic Acids Res       Date:  1975-10       Impact factor: 16.971

8.  Cell cycle-specific reactivation of an inactive X-chromosome locus by 5-azadeoxycytidine.

Authors:  P A Jones; S M Taylor; T Mohandas; L J Shapiro
Journal:  Proc Natl Acad Sci U S A       Date:  1982-02       Impact factor: 11.205

9.  5-azacytidine selectively increases gamma-globin synthesis in a patient with beta+ thalassemia.

Authors:  T J Ley; J DeSimone; N P Anagnou; G H Keller; R K Humphries; P H Turner; N S Young; P Keller; A W Nienhuis
Journal:  N Engl J Med       Date:  1982-12-09       Impact factor: 91.245

10.  The pattern of DNA methylation in the delta-crystallin genes in transdifferentiating neural retina cultures.

Authors:  L H Errington; D N Cooper; R M Clayton
Journal:  Differentiation       Date:  1983       Impact factor: 3.880

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  51 in total

1.  Hypermethylation of human DNA sequences in embryonal carcinoma cells and somatic tissues but not in sperm.

Authors:  X Y Zhang; P T Loflin; C W Gehrke; P A Andrews; M Ehrlich
Journal:  Nucleic Acids Res       Date:  1987-11-25       Impact factor: 16.971

2.  Counterselection of GATC sequences in enterobacteriophages by the components of the methyl-directed mismatch repair system.

Authors:  P Deschavanne; M Radman
Journal:  J Mol Evol       Date:  1991-08       Impact factor: 2.395

Review 3.  Restriction endonucleases in the study of eukaryotic chromosomes.

Authors:  C López-Fernández; J Gosálvez; L Ferrucci; R Mezzannotte
Journal:  Genetica       Date:  1991       Impact factor: 1.082

4.  Effects of DNA methylation on specific transcription by RNA polymerase II in vitro.

Authors:  P L Molloy
Journal:  Mol Biol Rep       Date:  1986       Impact factor: 2.316

5.  DNA methylation of embryogenic carrot cell cultures and its variations as caused by mutation, differentiation, hormones and hypomethylating drugs.

Authors:  F Loschiavo; L Pitto; G Giuliano; G Torti; V Nuti-Ronchi; D Marazziti; R Vergara; S Orselli; M Terzi
Journal:  Theor Appl Genet       Date:  1989-03       Impact factor: 5.699

6.  Analysis of the rearrangements associated with carcinogen-induced activation of the hamster thymidine kinase gene.

Authors:  F G Barr; S Rajagopalan; M W Lieberman
Journal:  Nucleic Acids Res       Date:  1990-01-11       Impact factor: 16.971

7.  Methylated DNA-binding protein is present in various mammalian cell types.

Authors:  P C Supakar; D Weist; D L Zhang; N Inamdar; X Y Zhang; R Khan; K C Ehrlich; M Ehrlich
Journal:  Nucleic Acids Res       Date:  1988-08-25       Impact factor: 16.971

Review 8.  The mutational spectrum of single base-pair substitutions causing human genetic disease: patterns and predictions.

Authors:  D N Cooper; M Krawczak
Journal:  Hum Genet       Date:  1990-06       Impact factor: 4.132

9.  Hypomethylation of the human HLA-DR alpha gene in breast carcinomas and autologous metastases.

Authors:  R Barbieri; A P Rimondi; D Buzzoni; L Luppi; C Nastruzzi; P Orlando; R Gambari
Journal:  Clin Exp Metastasis       Date:  1989 Jul-Aug       Impact factor: 5.150

10.  5-Methyldeoxycytidine in the Physarum minichromosome containing the ribosomal RNA genes.

Authors:  C A Cooney; H R Matthews; E M Bradbury
Journal:  Nucleic Acids Res       Date:  1984-02-10       Impact factor: 16.971

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