Literature DB >> 6096222

Tandem repeated DNA in an intergenic region of herpes simplex virus type 1 (Patton).

K Umene, R J Watson, L W Enquist.   

Abstract

When the entire US region of HSV-1 (Patton) was cloned as an EcoRI fragment in bacteriophage lambda gtWES, the BamHI B6B5 fragment was observed to vary in size among independent isolates [Umene and Enquist, Gene 13 (1981) 251-268]. This fragment polymorphism also occurred in DNA of HSV-1 single plaque isolates. We report here that this heterogeneity is due to variation in copy number of a 15-bp tandem repeat of sequence 5'-CCACTCCCCACCCAC-3', which apparently lies in an intergenic region of the HSV-1 DNA.

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Year:  1984        PMID： 6096222     DOI： 10.1016/0378-1119(84)90102-1

Source DB:  PubMed          Journal:  Gene        ISSN： 0378-1119            Impact factor:   3.688


  17 in total

1.  Homogeneity and diversity of genome polymorphism in a set of herpes simplex virus type 1 strains classified as the same genotypic group.

Authors:  K Umene; H Sakaoka
Journal:  Arch Virol       Date:  1991       Impact factor: 2.574

2.  Recombination of the internal direct repeat element DR2 responsible for the fluidity of the a sequence of herpes simplex virus type 1.

Authors:  K Umene
Journal:  J Virol       Date:  1991-10       Impact factor: 5.103

3.  Bovine herpesvirus 1 isolates contain variable copy numbers of GC-rich tandem repeats in the gI non-coding regions of their genomes.

Authors:  S A Nadin-Davis; C Lutze-Wallace; X Zhong
Journal:  Virus Genes       Date:  1996       Impact factor: 2.332

4.  Shared ancestry of herpes simplex virus 1 strain Patton with recent clinical isolates from Asia and with strain KOS63.

Authors:  Aldo Pourchet; Richard Copin; Matthew C Mulvey; Bo Shopsin; Ian Mohr; Angus C Wilson
Journal:  Virology       Date:  2017-12       Impact factor: 3.616

5.  Isolation of novel herpes simplex virus type 1 derivatives with tandem duplications of DNA sequences encoding immediate-early mRNA-5 and an origin of replication.

Authors:  K Umene; L W Enquist
Journal:  J Virol       Date:  1985-02       Impact factor: 5.103

6.  Short repeats cause heterogeneity at genomic terminus of bovine herpesvirus 1.

Authors:  W Hammerschmidt; H Ludwig; H J Buhk
Journal:  J Virol       Date:  1986-04       Impact factor: 5.103

7.  Restriction endonucleases recognizing DNA sequences of four base pairs facilitate differentiation of herpes simplex virus type 1 strains.

Authors:  K Umene
Journal:  Arch Virol       Date:  1987       Impact factor: 2.574

8.  Sequence variability in clinical and laboratory isolates of herpes simplex virus 1 reveals new mutations.

Authors:  Moriah L Szpara; Lance Parsons; L W Enquist
Journal:  J Virol       Date:  2010-03-10       Impact factor: 5.103

9.  Numerous length polymorphisms at short tandem repeats in human cytomegalovirus.

Authors:  C L Davis; D Field; D Metzgar; R Saiz; P A Morin; I L Smith; S A Spector; C Wills
Journal:  J Virol       Date:  1999-08       Impact factor: 5.103

10.  Intratypic variability of a tandem repeat locus within the DNA polymerase gene of human herpes simplex virus type 2.

Authors:  Yongjiang Sun; Roy Kum Wah Chan; Suat Hoon Tan
Journal:  Virus Genes       Date:  2004-01       Impact factor: 2.332
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