Literature DB >> 3005657

Short repeats cause heterogeneity at genomic terminus of bovine herpesvirus 1.

W Hammerschmidt, H Ludwig, H J Buhk.   

Abstract

Analysis of the genomes of different bovine herpesvirus 1 strains revealed a UL terminal HindIII fragment differing in size (from 2.4 to 2.8 kilobases). This fragment polymorphism occurred in the DNA of a wild-type isolate, in highly passaged, apathogenic tissue culture derivatives, and in plaque-purified substrains. This heterogeneity was due to variations in the copy number of a 14-base-pair tandem repeat comprising the base sequence 5'-GCTCCTCCTCCCTC-3', which also exists, with some differences, in other short reiteration sequences of herpes simplex virus type 1, Epstein-Barr virus, and related human cellular DNA. Furthermore, the tandem repeat array was located in close proximity to the left end of the viral genome and may functionally be involved in viral replication.

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Year:  1986        PMID： 3005657      PMCID： PMC252874     

Source DB:  PubMed          Journal:  J Virol        ISSN： 0022-538X            Impact factor:   5.103


  20 in total

1.  Analysis of the structure of the genome of pseudorabies virus.

Authors:  T Ben-Porat; F J Rixon; M L Blankenship
Journal:  Virology       Date:  1979-06       Impact factor: 3.616

2.  Detection of specific sequences among DNA fragments separated by gel electrophoresis.

Authors:  E M Southern
Journal:  J Mol Biol       Date:  1975-11-05       Impact factor: 5.469

3.  Labeling deoxyribonucleic acid to high specific activity in vitro by nick translation with DNA polymerase I.

Authors:  P W Rigby; M Dieckmann; C Rhodes; P Berg
Journal:  J Mol Biol       Date:  1977-06-15       Impact factor: 5.469

4.  Repeat arrays in cellular DNA related to the Epstein-Barr virus IR3 repeat.

Authors:  M Heller; E Flemington; E Kieff; P Deininger
Journal:  Mol Cell Biol       Date:  1985-03       Impact factor: 4.272

5.  Nucleotide sequences of the joint between the L and S segments of herpes simplex virus types 1 and 2.

Authors:  A J Davison; N M Wilkie
Journal:  J Gen Virol       Date:  1981-08       Impact factor: 3.891

6.  Structure of the genome of equine herpesvirus type 1.

Authors:  B E Henry; R A Robinson; S A Dauenhauer; S S Atherton; G S Hayward; D J O'Callaghan
Journal:  Virology       Date:  1981-11       Impact factor: 3.616

7.  Cloning in single-stranded bacteriophage as an aid to rapid DNA sequencing.

Authors:  F Sanger; A R Coulson; B G Barrell; A J Smith; B A Roe
Journal:  J Mol Biol       Date:  1980-10-25       Impact factor: 5.469

8.  Simple repeat sequence in Epstein-Barr virus DNA is transcribed in latent and productive infections.

Authors:  M Heller; V van Santen; E Kieff
Journal:  J Virol       Date:  1982-10       Impact factor: 5.103

9.  A system for shotgun DNA sequencing.

Authors:  J Messing; R Crea; P H Seeburg
Journal:  Nucleic Acids Res       Date:  1981-01-24       Impact factor: 16.971

10.  Comparison of the genomes of infectious bovine rhinotracheitis and infectious pustular vulvovaginitis virus strains by restriction endonuclease analysis.

Authors:  M Engels; F Steck; R Wyler
Journal:  Arch Virol       Date:  1981       Impact factor: 2.574
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  10 in total

1.  Sequence of the genome ends and of the junction between the ends in concatemeric DNA of pseudorabies virus.

Authors:  L Harper; J Demarchi; T Ben-Porat
Journal:  J Virol       Date:  1986-12       Impact factor: 5.103

2.  Immediate-early transcription over covalently joined genome ends of bovine herpesvirus 1: the circ gene.

Authors:  C Fraefel; U V Wirth; B Vogt; M Schwyzer
Journal:  J Virol       Date:  1993-03       Impact factor: 5.103

3.  Functional domains within the a sequence involved in the cleavage-packaging of herpes simplex virus DNA.

Authors:  L P Deiss; J Chou; N Frenkel
Journal:  J Virol       Date:  1986-09       Impact factor: 5.103

4.  Genomic termini of equine herpesvirus 1.

Authors:  S I Chowdhury; H J Buhk; H Ludwig; W Hammerschmidt
Journal:  J Virol       Date:  1990-02       Impact factor: 5.103

5.  High frequency intergenomic recombination of suid herpesvirus 1 (SHV-1, Aujeszky's disease virus).

Authors:  L S Christensen; B Lomniczi
Journal:  Arch Virol       Date:  1993       Impact factor: 2.574

6.  Definition of the minimal cis-acting sequences necessary for genome maturation of the herpesvirus murine cytomegalovirus.

Authors:  Jian Ben Wang; Daniel E Nixon; Michael A McVoy
Journal:  J Virol       Date:  2007-12-19       Impact factor: 5.103

7.  Structure and heterogeneity of the a sequences of human herpesvirus 6 strain variants U1102 and Z29 and identification of human telomeric repeat sequences at the genomic termini.

Authors:  B J Thomson; S Dewhurst; D Gray
Journal:  J Virol       Date:  1994-05       Impact factor: 5.103

8.  Transcriptional analysis of the bovine herpesvirus 1 Cooper isolate. Temporal analysis and characterization of immediate-early, early, and late RNA.

Authors:  B S Seal; J M Irving; C A Whetstone
Journal:  Arch Virol       Date:  1991       Impact factor: 2.574

9.  The genomic diversity among equine herpesvirus-1 strains isolated in Japan.

Authors:  R Kirisawa; H Ohmori; H Iwai; Y Kawakami
Journal:  Arch Virol       Date:  1993       Impact factor: 2.574

10.  Specificity of cleavage in replicative-form DNA of bovine herpesvirus 1.

Authors:  W Hammerschmidt; H Ludwig; H J Buhk
Journal:  J Virol       Date:  1988-04       Impact factor: 5.103
  10 in total

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