Literature DB >> 6092059

Nucleotide sequence of the prokaryotic mobile genetic element IS30.

B Dalrymple, P Caspers, W Arber.   

Abstract

The complete nucleotide sequence of the mobile genetic element IS30, a resident of Escherichia coli K12, is 1221 bp long. A large open reading frame, preceded by possible transcription and translation control signals, could encode a basic protein of 383 amino acids which might presumably function as transposase. No large in-frame open reading frame is present on the opposite strand. The 26 bp long terminal inverted repeats have some sequence homology with the c-end of the phage Mu genome and with the terminal inverted repeats of the Halobacterium halobium insertion element ISH50. The IS30 sequence has no significant homology with any other sequenced prokaryotic insertion sequences.

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Year:  1984        PMID: 6092059      PMCID: PMC557656          DOI: 10.1002/j.1460-2075.1984.tb02104.x

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  34 in total

1.  A new method for sequencing DNA.

Authors:  A M Maxam; W Gilbert
Journal:  Proc Natl Acad Sci U S A       Date:  1977-02       Impact factor: 11.205

2.  Nucleotide sequence of an insertion element, IS1.

Authors:  H Ohtsubo; E Ohtsubo
Journal:  Proc Natl Acad Sci U S A       Date:  1978-02       Impact factor: 11.205

3.  Rearrangements of genetic material in Escherichia coli as observed on the bacteriophage P1 plasmid.

Authors:  W Arber; S Iida; H Jütte; P Caspers; J Meyer; C Hänni
Journal:  Cold Spring Harb Symp Quant Biol       Date:  1979

4.  Nucleotide sequences of the attachment sites of bacteriophage Mu DNA.

Authors:  R Kahmann; D Kamp
Journal:  Nature       Date:  1979-07-19       Impact factor: 49.962

5.  Nucleotide sequence of the transposable DNA-element IS2.

Authors:  D Ghosal; H Sommer; H Saedler
Journal:  Nucleic Acids Res       Date:  1979-03       Impact factor: 16.971

6.  Integration of IS3 into IS2 generates a short sequence duplication.

Authors:  H Sommer; J Cullum; H Saedler
Journal:  Mol Gen Genet       Date:  1979

7.  Host specificity of DNA produced by Escherichia coli: bacterial mutations affecting the restriction and modification of DNA.

Authors:  W B Wood
Journal:  J Mol Biol       Date:  1966-03       Impact factor: 5.469

8.  DNA sequencing with chain-terminating inhibitors.

Authors:  F Sanger; S Nicklen; A R Coulson
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205

9.  The 3'-terminal sequence of Escherichia coli 16S ribosomal RNA: complementarity to nonsense triplets and ribosome binding sites.

Authors:  J Shine; L Dalgarno
Journal:  Proc Natl Acad Sci U S A       Date:  1974-04       Impact factor: 11.205

10.  IS2 insertion is a major cause of spontaneous mutagenesis of the bacteriophage P1: non-random distribution of target sites.

Authors:  C Sengstag; W Arber
Journal:  EMBO J       Date:  1983       Impact factor: 11.598

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  34 in total

1.  CS5 pilus biosynthesis genes from enterotoxigenic Escherichia coli O115:H40.

Authors:  T G Duthy; L H Staendner; P A Manning; M W Heuzenroeder
Journal:  J Bacteriol       Date:  1999-09       Impact factor: 3.490

2.  A family of developmentally excised DNA elements in Tetrahymena is under selective pressure to maintain an open reading frame encoding an integrase-like protein.

Authors:  J A Gershan; K M Karrer
Journal:  Nucleic Acids Res       Date:  2000-11-01       Impact factor: 16.971

3.  Identification and distribution of new insertion sequences in the genome of alkaliphilic Bacillus halodurans C-125.

Authors:  H Takami; C G Han; Y Takaki; E Ohtsubo
Journal:  J Bacteriol       Date:  2001-07       Impact factor: 3.490

4.  Mutational analysis of the histidine operon promoter of Salmonella typhimurium.

Authors:  R F Shand; P H Blum; D L Holzschu; M S Urdea; S W Artz
Journal:  J Bacteriol       Date:  1989-11       Impact factor: 3.490

5.  Site-specific recombination by the DDE family member mobile element IS30 transposase.

Authors:  János Kiss; Mónika Szabó; Ferenc Olasz
Journal:  Proc Natl Acad Sci U S A       Date:  2003-12-09       Impact factor: 11.205

6.  The heat-stable toxin I gene from Escherichia coli 18D.

Authors:  W S Dallas
Journal:  J Bacteriol       Date:  1990-09       Impact factor: 3.490

7.  Functional organization of the inverted repeats of IS30.

Authors:  Mónika Szabó; János Kiss; Ferenc Olasz
Journal:  J Bacteriol       Date:  2010-04-23       Impact factor: 3.490

8.  Cosmid-derived map of E. coli strain BHB2600 in comparison to the map of strain W3110.

Authors:  R P Birkenbihl; W Vielmetter
Journal:  Nucleic Acids Res       Date:  1989-07-11       Impact factor: 16.971

9.  Complete maps of IS1, IS2, IS3, IS4, IS5, IS30 and IS150 locations in Escherichia coli K12.

Authors:  R P Birkenbihl; W Vielmetter
Journal:  Mol Gen Genet       Date:  1989-12

10.  Activation of a cryptic pathway for threonine metabolism via specific IS3-mediated alteration of promoter structure in Escherichia coli.

Authors:  B D Aronson; M Levinthal; R L Somerville
Journal:  J Bacteriol       Date:  1989-10       Impact factor: 3.490

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