Literature DB >> 6091036

Analysis of a cloned colicin Ib gene: complete nucleotide sequence and implications for regulation of expression.

J M Varley, G J Boulnois.   

Abstract

The complete nucleotide sequence of a 2,971 base pair EcoRI fragment carrying the structural gene for colicin Ib has been determined. The length of the gene is 1,881 nucleotides which is predicted to produce a protein of 626 amino acids and of molecular weight 71,364. The structural gene is flanked by likely promoter and terminator signals and in between the promoter and the ribosome binding site is an inverted repeat sequence which resembles other sequences known to bind the LexA protein. Further analysis of the 5' flanking sequences revealed a second region which may act either as a second LexA binding site and/or in the binding of cyclic AMP receptor protein. Comparison of the predicted amino acid sequence of colicin Ib with that of colicins A and E1 reveals localised homology. The implications of these similarities in the proteins and of regulation of the colicin Ib structural gene are discussed.

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Year:  1984        PMID: 6091036      PMCID: PMC320112          DOI: 10.1093/nar/12.17.6727

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  39 in total

Review 1.  Colicinogeny and related phenomena.

Authors:  K G Hardy
Journal:  Bacteriol Rev       Date:  1975-12

2.  Mode of action of colicin Ia: effect of colicin on the Escherichia coli proton electrochemical gradient.

Authors:  H Tokuda; J Konisky
Journal:  Proc Natl Acad Sci U S A       Date:  1978-06       Impact factor: 11.205

3.  Construction and characterization of new cloning vehicles. III. Derivatives of plasmid pBR322 carrying unique Eco RI sites for selection of Eco RI generated recombinant DNA molecules.

Authors:  F Bolivar
Journal:  Gene       Date:  1978-10       Impact factor: 3.688

4.  Characterization of colicin Ia and colicin Ib. Chemical studies of protein structure.

Authors:  J Konisky
Journal:  J Biol Chem       Date:  1972-06-25       Impact factor: 5.157

5.  A film detection method for tritium-labelled proteins and nucleic acids in polyacrylamide gels.

Authors:  W M Bonner; R A Laskey
Journal:  Eur J Biochem       Date:  1974-07-01

6.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

7.  Determinant of cistron specificity in bacterial ribosomes.

Authors:  J Shine; L Dalgarno
Journal:  Nature       Date:  1975-03-06       Impact factor: 49.962

8.  The gamma delta sequence of F is an insertion sequence.

Authors:  M S Guyer
Journal:  J Mol Biol       Date:  1978-12-15       Impact factor: 5.469

9.  The transposon Tn1 as a probe for studying ColE1 structure and function.

Authors:  G Dougan; D Sherratt
Journal:  Mol Gen Genet       Date:  1977-03-07

10.  DNA sequencing with chain-terminating inhibitors.

Authors:  F Sanger; S Nicklen; A R Coulson
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205

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  19 in total

1.  Ion selectivity of colicin E1: II. Permeability to organic cations.

Authors:  J O Bullock; E R Kolen; J L Shear
Journal:  J Membr Biol       Date:  1992-05       Impact factor: 1.843

2.  Mechanisms of antibacterial action of tachyplesins and polyphemusins, a group of antimicrobial peptides isolated from horseshoe crab hemocytes.

Authors:  M Ohta; H Ito; K Masuda; S Tanaka; Y Arakawa; R Wacharotayankun; N Kato
Journal:  Antimicrob Agents Chemother       Date:  1992-07       Impact factor: 5.191

3.  Formation of ion channels by colicin B in planar lipid bilayers.

Authors:  J O Bullock; S K Armstrong; J L Shear; D P Lies; M A McIntosh
Journal:  J Membr Biol       Date:  1990-03       Impact factor: 1.843

4.  Colicin N forms voltage- and pH-dependent channels in planar lipid bilayer membranes.

Authors:  H U Wilmsen; A P Pugsley; F Pattus
Journal:  Eur Biophys J       Date:  1990       Impact factor: 1.733

5.  Permeation of bacterial cells, permeation of cytoplasmic and artificial membrane vesicles, and channel formation on lipid bilayers by peptide antibiotic AS-48.

Authors:  A Gálvez; M Maqueda; M Martínez-Bueno; E Valdivia
Journal:  J Bacteriol       Date:  1991-01       Impact factor: 3.490

6.  Nucleotide sequence of the colicin B activity gene cba: consensus pentapeptide among TonB-dependent colicins and receptors.

Authors:  E Schramm; J Mende; V Braun; R M Kamp
Journal:  J Bacteriol       Date:  1987-07       Impact factor: 3.490

7.  Gating of a voltage-dependent channel (colicin E1) in planar lipid bilayers: the role of protein translocation.

Authors:  S L Slatin; L Raymond; A Finkelstein
Journal:  J Membr Biol       Date:  1986       Impact factor: 1.843

8.  Primary structure of colicin M, an inhibitor of murein biosynthesis.

Authors:  J Köck; T Olschläger; R M Kamp; V Braun
Journal:  J Bacteriol       Date:  1987-07       Impact factor: 3.490

9.  Ion selectivity of colicin E1: III. Anion permeability.

Authors:  J O Bullock; E R Kolen
Journal:  J Membr Biol       Date:  1995-03       Impact factor: 1.843

10.  Evidence that the immunity protein inactivates colicin 5 immediately prior to the formation of the transmembrane channel.

Authors:  H Pilsl; V Braun
Journal:  J Bacteriol       Date:  1995-12       Impact factor: 3.490

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