Literature DB >> 6087276

The internal regulated promoter of the deo operon of Escherichia coli K-12.

P Valentin-Hansen, K Hammer, J E Løve Larsen, I Svendsen.   

Abstract

Previous studies of the structure and regulation of the deo operon in Escherichia coli have localized an internal regulated promoter, called deoP3, in front of the two distal genes in the operon. We report here the nucleotide sequence of the distal portion of the deoA, the deoA-deoB intercistronic region and the first part of the deoB gene, and show that deoP3 overlaps the distal segment of the deoA gene. The location of the internal promoter and the transcriptional start site were determined by means of 1) sequence homology to the consensus promoter sequence of E. coli, 2) high resolution S1 nuclease mapping of in vivo transcripts and 3) in vivo regulation of beta-galactosidase from low as well as high copy number P31acZ protein fusion vectors.

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Year:  1984        PMID: 6087276      PMCID: PMC318914          DOI: 10.1093/nar/12.13.5211

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  26 in total

1.  Uridine phosphorylase from Escherichia coli. Physical and chemical characterization.

Authors:  J C Leer; K Hammer-Jespersen; M Schwartz
Journal:  Eur J Biochem       Date:  1977-05-02

Review 2.  Regulatory sequences involved in the promotion and termination of RNA transcription.

Authors:  M Rosenberg; D Court
Journal:  Annu Rev Genet       Date:  1979       Impact factor: 16.830

3.  Induction of enzymes involed in the catabolism of deoxyribonucleosides and ribonucleosides in Escherichia coli K 12.

Authors:  K Hammer-Jespersen; A Munch-Petersen; M Schwartz; P Nygaard
Journal:  Eur J Biochem       Date:  1971-04-30

4.  Attenuation and processing of RNA from the rplJL--rpoBC transcription unit of Escherichia coli.

Authors:  G Barry; C Squires; C L Squires
Journal:  Proc Natl Acad Sci U S A       Date:  1980-06       Impact factor: 11.205

5.  Multiple regulation of nucleoside catabolizing enzymes: effects of a polar dra mutation on the deo enzymes.

Authors:  H Albrechtsen; K Hammer-Jespersen; A Munch-Petersen; N Fiil
Journal:  Mol Gen Genet       Date:  1976-07-23

6.  The operon that encodes the sigma subunit of RNA polymerase also encodes ribosomal protein S21 and DNA primase in E. coli K12.

Authors:  Z F Burton; C A Gross; K K Watanabe; R R Burgess
Journal:  Cell       Date:  1983-02       Impact factor: 41.582

7.  Identification of trp-p2, an internal promoter in the tryptophan operon of Escherichia coli.

Authors:  H Horowitz; T Platt
Journal:  J Mol Biol       Date:  1982-04-05       Impact factor: 5.469

Review 8.  E. coli RNA polymerase interacts homologously with two different promoters.

Authors:  U Siebenlist; R B Simpson; W Gilbert
Journal:  Cell       Date:  1980-06       Impact factor: 41.582

9.  The primary structure of Escherichia coli K12 2-deoxyribose 5-phosphate aldolase. Nucleotide sequence of the deoC gene and the amino acid sequence of the enzyme.

Authors:  P Valentin-Hansen; F Boëtius; K Hammer-Jespersen; I Svendsen
Journal:  Eur J Biochem       Date:  1982-07

10.  Nucleotide sequence of the trpD and trpC genes of Salmonella typhimurium.

Authors:  H Horowitz; J Van Arsdell; T Platt
Journal:  J Mol Biol       Date:  1983-10-05       Impact factor: 5.469

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  14 in total

1.  Identification of the promoter region of the ribosome-releasing factor cistron (frr).

Authors:  I Shimizu; A Kaji
Journal:  J Bacteriol       Date:  1991-08       Impact factor: 3.490

Review 2.  Linkage map of Escherichia coli K-12, edition 10: the traditional map.

Authors:  M K Berlyn
Journal:  Microbiol Mol Biol Rev       Date:  1998-09       Impact factor: 11.056

Review 3.  Linkage map of Escherichia coli K-12, edition 8.

Authors:  B J Bachmann
Journal:  Microbiol Rev       Date:  1990-06

4.  Examination of the internal promoter, PE, in the ilvGMEDA operon of E. coli K-12.

Authors:  R C Wek; G W Hatfield
Journal:  Nucleic Acids Res       Date:  1986-03-25       Impact factor: 16.971

5.  Effect of an artificial RNA marker on gene expression in Escherichia coli.

Authors:  Don L Tucker; Fathi Karouia; Jim Wang; Yi Luo; Tong-Bin Li; Richard C Willson; Yuriy Fofanov; George E Fox
Journal:  Appl Environ Microbiol       Date:  2005-07       Impact factor: 4.792

6.  Analysis of E. coli promoter sequences.

Authors:  C B Harley; R P Reynolds
Journal:  Nucleic Acids Res       Date:  1987-03-11       Impact factor: 16.971

7.  Compilation of E. coli mRNA promoter sequences.

Authors:  S Lisser; H Margalit
Journal:  Nucleic Acids Res       Date:  1993-04-11       Impact factor: 16.971

8.  Identification of Mycoplasma pirum genes involved in the salvage pathways for nucleosides.

Authors:  T N Tham; S Ferris; R Kovacic; L Montagnier; A Blanchard
Journal:  J Bacteriol       Date:  1993-08       Impact factor: 3.490

9.  Analysis of the promoters for the two immunity genes present in the ColE3-CA38 plasmid using two new promoter probe vectors.

Authors:  K F Chak; R James
Journal:  Nucleic Acids Res       Date:  1985-04-11       Impact factor: 16.971

10.  Analysis and comparison of the internal promoter, pE, of the ilvGMEDA operons from Escherichia coli K-12 and Salmonella typhimurium.

Authors:  J M Lopes; R P Lawther
Journal:  Nucleic Acids Res       Date:  1986-03-25       Impact factor: 16.971

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