Literature DB >> 5360040

Refinement of protein conformations using a macromolecular energy minimization procedure.

M Levitt, S Lifson.   

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Year:  1969        PMID： 5360040     DOI： 10.1016/0022-2836(69)90421-5

Source DB:  PubMed          Journal:  J Mol Biol        ISSN： 0022-2836            Impact factor:   5.469


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  76 in total

1.  A step toward the prediction of the fluorescence lifetimes of tryptophan residues in proteins based on structural and spectral data.

Authors:  A Sillen; J F Díaz; Y Engelborghs
Journal:  Protein Sci       Date:  2000-01       Impact factor: 6.725

2.  Dynamics of the aromatic amino acid residues in the globular conformation of the basic pancreatic trypsin inhibitor (BPTI). II. Semi-empirical energy calculations.

Authors:  R Hetzel; K Wüthrich; J Deisenhofer; R Huber
Journal:  Biophys Struct Mech       Date:  1976-08-23

3.  3D-QSAR and molecular modeling of HIV-1 integrase inhibitors.

Authors:  Mahindra T Makhija; Vithal M Kulkarni
Journal:  J Comput Aided Mol Des       Date:  2002-03       Impact factor: 3.686

4.  Conformational optimization with natural degrees of freedom: a novel stochastic chain closure algorithm.

Authors:  Peter Minary; Michael Levitt
Journal:  J Comput Biol       Date:  2010-08       Impact factor: 1.479

5.  Balancing target flexibility and target denaturation in computational fragment-based inhibitor discovery.

Authors:  Theresa J Foster; Alexander D MacKerell; Olgun Guvench
Journal:  J Comput Chem       Date:  2012-05-28       Impact factor: 3.376

6.  Sidechain torsional potentials and motion of amino acids in porteins: bovine pancreatic trypsin inhibitor.

Authors:  B R Gelin; M Karplus
Journal:  Proc Natl Acad Sci U S A       Date:  1975-06       Impact factor: 11.205

Review 7.  Fragment-based error estimation in biomolecular modeling.

Authors:  John C Faver; Kenneth M Merz
Journal:  Drug Discov Today       Date:  2013-08-27       Impact factor: 7.851

8.  Computer simulations of protein functions: searching for the molecular origin of the replication fidelity of DNA polymerases.

Authors:  Jan Florián; Myron F Goodman; Arieh Warshel
Journal:  Proc Natl Acad Sci U S A       Date:  2005-04-29       Impact factor: 11.205

9.  Refinement of the X-ray Structure of Rubredoxin by Conformational Energy Calculations.

Authors:  D Rasse; P K Warme; H A Scheraga
Journal:  Proc Natl Acad Sci U S A       Date:  1974-09       Impact factor: 11.205

10.  Automated conformational energy fitting for force-field development.

Authors:  Olgun Guvench; Alexander D MacKerell
Journal:  J Mol Model       Date:  2008-05-06       Impact factor: 1.810
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