Literature DB >> 24407415

[The extent of asymmetric distribution of DNA-bases in genes].

R Piechocki1, W Berg, A Bergmann.   

Abstract

The correlation between the evolutionary rates of proteins and frequencies of DNA-bases in the first and in the second position of corresponding codons was investigated.Adenine in the first and guanine in the second position showed the strongest positive correlation with evolutionary rate whereas cytosine in the first as well as in the second position showed a strong negative correlation. The correlation can not be explained by a significant change in GC-content but rather by the asymmetric distribution of the base pairs. The extent of pyrimidine/purine asymmetry was assessed quantitatively.Variations in frequencies of bases lead to changed frequencies of neighbouring bases and thus to changed interactions between adjacent bases in the genes. Slowly evolving proteins are coded by genes with a maximum of thermodynamic interactions between the adjacent bases in the codogeneous chain as well as in the complementary chain. The genes for highly evolving proteins are characterized by minima interactions between adjacent bases.The possible relations between asymmetry and mutability of genes are discussed.

Entities:  

Year:  1977        PMID: 24407415     DOI: 10.1007/BF00275131

Source DB:  PubMed          Journal:  Theor Appl Genet        ISSN: 0040-5752            Impact factor:   5.699


  15 in total

1.  ON THE TOPOGRAPHY OF THE GENETIC FINE STRUCTURE.

Authors:  S Benzer
Journal:  Proc Natl Acad Sci U S A       Date:  1961-03       Impact factor: 11.205

2.  CORRELATION BETWEEN BASE COMPOSITION OF DEOXYRIBONUCLEIC ACID AND AMINO ACID COMPOSITION OF PROTEIN.

Authors:  N Sueoka
Journal:  Proc Natl Acad Sci U S A       Date:  1961-08       Impact factor: 11.205

3.  On some principles governing molecular evolution.

Authors:  M Kimura; T Ohta
Journal:  Proc Natl Acad Sci U S A       Date:  1974-07       Impact factor: 11.205

4.  Protein polymorphism as a phase of molecular evolution.

Authors:  M Kimura; T Ohta
Journal:  Nature       Date:  1971-02-12       Impact factor: 49.962

5.  Genetic variability maintained in a finite population due to mutational production of neutral and nearly neutral isoalleles.

Authors:  M Kimura
Journal:  Genet Res       Date:  1968-06       Impact factor: 1.588

6.  Non-Darwinian evolution: a critique.

Authors:  R C Richmond
Journal:  Nature       Date:  1970-03-14       Impact factor: 49.962

7.  Non-Darwinian evolution.

Authors:  J L King; T H Jukes
Journal:  Science       Date:  1969-05-16       Impact factor: 47.728

8.  Non-Darwinian evolution: consequences for neutral allelic variation.

Authors:  N Arnheim; C E Taylor
Journal:  Nature       Date:  1969-08-30       Impact factor: 49.962

9.  The influence of neighboring base pairs upon base-pair substitution mutation rates.

Authors:  R E Koch
Journal:  Proc Natl Acad Sci U S A       Date:  1971-04       Impact factor: 11.205

10.  Amino acid composition of proteins: Selection against the genetic code.

Authors:  T H Jukes; R Holmquist; H Moise
Journal:  Science       Date:  1975-07-04       Impact factor: 47.728

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