Literature DB >> 5274444

Rate acceleration by stereopopulation control: models for enzyme action.

S Milstien, L A Cohen.   

Abstract

As a result of alkyl substitution in both aromatic ring and side chain, the rate constant for acid-catalyzed lactonization of hydrocoumaric acid is increased by factors as high as 10(11) and, in comparison with the bimolecular esterification of phenol and acetic acid, by almost 10(16). In the most favorable case studied, the half-life of the phenolic acid (imidazole buffer, pH 7, 30 degrees C) is 6 sec, with 90% of the total rate being due to catalysis by the buffer species. The effect is attributed to a unique interlocking of methyl groups, which produces a severe conformational restriction of the side chain and increases greatly the population of the most productive conformer. This phenomenon is presented as a model for the conformational restraint imposed by an enzyme on its substrate. The magnitude of the effect suggests that the contribution of substrate "freezing" to total rate enhancement by an enzyme can be considerably greater than previously supposed and may in fact be sufficient to complete the justification for enzyme catalysis.

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Year:  1970        PMID: 5274444      PMCID: PMC283329          DOI: 10.1073/pnas.67.3.1143

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  5 in total

1.  A source for the special catalytic power of enzymes: orbital steering.

Authors:  D R Storm; D E Koshland
Journal:  Proc Natl Acad Sci U S A       Date:  1970-06       Impact factor: 11.205

Review 2.  The catalytic and regulatory properties of enzymes.

Authors:  D E Koshland; K E Neet
Journal:  Annu Rev Biochem       Date:  1968       Impact factor: 23.643

3.  The intramolecular facilitated hydrolytic rates of methyl-substituted succinanilic acids.

Authors:  T Higuchi; L Eberson; A K Herd
Journal:  J Am Chem Soc       Date:  1966-08-20       Impact factor: 15.419

4.  The conservation of oxidative energy in phosphate-free systems. Formation of acyl anhydrides via the oxidation of hydroquinone monocarboxylic esters.

Authors:  J W Thanassi; L A Cohen
Journal:  Biochim Biophys Acta       Date:  1969-04-08

5.  The gem effect. II. The influence of 3-mono- and 3,3-disubstitution on the rates of solvolysis of mono-p-bromophenyl glutarate.

Authors:  T C Bruice; W C Bradbury
Journal:  J Am Chem Soc       Date:  1965-11-05       Impact factor: 15.419

  5 in total
  23 in total

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Authors:  Rafik Karaman; Hiba Ghareeb; Khuloud Kamal Dajani; Laura Scrano; Hussein Hallak; Saleh Abu-Lafi; Gennaro Mecca; Sabino A Bufo
Journal:  J Comput Aided Mol Des       Date:  2013-07-24       Impact factor: 3.686

2.  History of Chemistry in the National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK).

Authors:  Kenneth L Kirk; Kenneth A Jacobson
Journal:  Bull Hist Chem       Date:  2014-01-01

3.  Computationally designed prodrugs of statins based on Kirby's enzyme model.

Authors:  Rafik Karaman; Wajd Amly; Laura Scrano; Gennaro Mecca; Sabino A Bufo
Journal:  J Mol Model       Date:  2013-07-09       Impact factor: 1.810

4.  Determining the catalytic role of remote substrate binding interactions in ketosteroid isomerase.

Authors:  Jason P Schwans; Daniel A Kraut; Daniel Herschlag
Journal:  Proc Natl Acad Sci U S A       Date:  2009-08-12       Impact factor: 11.205

5.  Computer-assisted design for paracetamol masking bitter taste prodrugs.

Authors:  Hatem Hejaz; Rafik Karaman; Mustafa Khamis
Journal:  J Mol Model       Date:  2011-04-15       Impact factor: 1.810

6.  Entropic contributions to rate accelerations in enzymic and intramolecular reactions and the chelate effect.

Authors:  M I Page; W P Jencks
Journal:  Proc Natl Acad Sci U S A       Date:  1971-08       Impact factor: 11.205

7.  Visible-to-NIR-Light Activated Release: From Small Molecules to Nanomaterials.

Authors:  Roy Weinstain; Tomáš Slanina; Dnyaneshwar Kand; Petr Klán
Journal:  Chem Rev       Date:  2020-10-30       Impact factor: 60.622

8.  Chemical syntheses and in vitro antibacterial activity of two desferrioxamine B-ciprofloxacin conjugates with potential esterase and phosphatase triggered drug release linkers.

Authors:  Cheng Ji; Marvin J Miller
Journal:  Bioorg Med Chem       Date:  2012-05-02       Impact factor: 3.641

Review 9.  New directions in the chemistry of natural products: the organic chemist as a pathfinder for biochemistry and medicine.

Authors:  B Witkop
Journal:  Experientia       Date:  1971-10-15

10.  Ground state destabilization from a positioned general base in the ketosteroid isomerase active site.

Authors:  Eliza A Ruben; Jason P Schwans; Matthew Sonnett; Aditya Natarajan; Ana Gonzalez; Yingssu Tsai; Daniel Herschlag
Journal:  Biochemistry       Date:  2013-01-30       Impact factor: 3.162

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