Literature DB >> 5256996

On the mechanism of ribonuclease action.

D A Usher.   

Abstract

All the suggestions that have been made for the mechanism of action of ribonuclease can be classified into one or another of two classes, depending on the geometry of the displacement in the first step. Studies of related model compounds indicate that one of these two classes should include as a part of the mechanism a pentacoordinate intermediate, which undergoes pseudorotation before product can be formed. It is unlikely that the pseudorotation would be rate-limiting in the reaction of the normal substrate.

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Year:  1969        PMID: 5256996      PMCID: PMC223648          DOI: 10.1073/pnas.62.3.661

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  7 in total

1.  REACTION OF BOVINE PANCREATIC RIBONUCLEASE A WITH 1,5-DIFLUORO-2,4-DINITROBENZENE. II. STRUCTURE OF AN INTRAMOLECULARLY BRIDGED DERIVATIVE.

Authors:  P S MARFEY; M UZIEL; J LITTLE
Journal:  J Biol Chem       Date:  1965-08       Impact factor: 5.157

2.  The active site and mechanism of action of bovine pancreatic ribonuclease.

Authors:  D FINDLAY; D G HERRIES; A P MATHIAS; B R RABIN; C A ROSS
Journal:  Nature       Date:  1961-05-27       Impact factor: 49.962

3.  The geometry of the transition state in the hydrolysis of phosphate esters.

Authors:  E A Dennis; F H Westheimer
Journal:  J Am Chem Soc       Date:  1966-07-20       Impact factor: 15.419

4.  The structure of ribonuclease-S at 3.5 A resolution.

Authors:  H W Wyckoff; K D Hardman; N M Allewell; T Inagami; L N Johnson; F M Richards
Journal:  J Biol Chem       Date:  1967-09-10       Impact factor: 5.157

5.  Structural studies of pancreatic ribonuclease.

Authors:  H A Scheraga
Journal:  Fed Proc       Date:  1967-09

6.  Mechanism of action of bovine pancreatic ribonuclease.

Authors:  A Deavin; A P Mathias; B R Rabin
Journal:  Nature       Date:  1966-07-16       Impact factor: 49.962

7.  Models of ribonuclease action. I. General species catalysis in the hydrolysis of a nucleotide diester analog.

Authors:  D G Oakenfull; D I Richardson; D A Usher
Journal:  J Am Chem Soc       Date:  1967-10-11       Impact factor: 15.419

  7 in total
  13 in total

1.  Relationship between internucleotide linkage geometry and the stability of RNA.

Authors:  G A Soukup; R R Breaker
Journal:  RNA       Date:  1999-10       Impact factor: 4.942

2.  DcpS can act in the 5'-3' mRNA decay pathway in addition to the 3'-5' pathway.

Authors:  Erwin van Dijk; Hervé Le Hir; Bertrand Séraphin
Journal:  Proc Natl Acad Sci U S A       Date:  2003-10-01       Impact factor: 11.205

3.  Hydrolytic stability of helical RNA: a selective advantage for the natural 3',5'-bond.

Authors:  D A Usher; A H McHale
Journal:  Proc Natl Acad Sci U S A       Date:  1976-04       Impact factor: 11.205

4.  Geometry of the dry-state oligomerization of 2',3'-cyclic phosphates.

Authors:  D A Usher; D Yee
Journal:  J Mol Evol       Date:  1979-11       Impact factor: 2.395

5.  Nucleic acids, proteins, and chirality.

Authors:  D A Usher; A T Profy; S A Walstrum; M C Needels; S C Bulack; K M Lo
Journal:  Orig Life       Date:  1984

6.  Productive and nonproductive binding to ribonuclease A: X-ray structure of two complexes with uridylyl(2',5')guanosine.

Authors:  L Vitagliano; A Merlino; A Zagari; L Mazzarella
Journal:  Protein Sci       Date:  2000-06       Impact factor: 6.725

7.  Geometry of the first step in the action of ribonuclease-A (in-line geometry-uridine2',3'-cyclic thiophosphate- 31 P NMR).

Authors:  D A Usher; E S Erenrich; F Eckstein
Journal:  Proc Natl Acad Sci U S A       Date:  1972-01       Impact factor: 11.205

8.  The structures of RNase A complexed with 3'-CMP and d(CpA): active site conformation and conserved water molecules.

Authors:  I Zegers; D Maes; M H Dao-Thi; F Poortmans; R Palmer; L Wyns
Journal:  Protein Sci       Date:  1994-12       Impact factor: 6.725

9.  Stereochemistry of polymerization by DNA-dependent RNA-polymerase from Escherichia coli: an investigation with a diastereomeric ATP-analogue.

Authors:  F Eckstein; V W Armstrong; H Sternbach
Journal:  Proc Natl Acad Sci U S A       Date:  1976-09       Impact factor: 11.205

10.  Hydrolysis of oligoribonucleotides: influence of sequence and length.

Authors:  R Kierzek
Journal:  Nucleic Acids Res       Date:  1992-10-11       Impact factor: 16.971

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