Literature DB >> 4517675

Nucleotide sequence of HS-beta satellite DNA from kangaroo rat Dipodomys ordii.

K Fry, R Poon, P Whitcome, J Idriss, W Salser, J Mazrimas, F Hatch.   

Abstract

The sequence of the highly repetitive satellite HS-beta DNA fraction from kangaroo rat Dipodomys ordii was determined independently by RNA and DNA sequencing techniques. A basic iterated sequence of 10 nucleotides with several mutational variations was found. Base-composition data are consistent with the proposed sequence and revealed a high content of 5-methylcytosine. DNA and RNA sequencing techniques used gave identical results, showing that the fidelity of synthesis of riboguanidine-substituted DNA under our conditions is adequate for nucleotide sequence studies.

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Year:  1973        PMID： 4517675      PMCID： PMC427073          DOI： 10.1073/pnas.70.9.2642

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN： 0027-8424            Impact factor:   11.205


  14 in total

1.  Base sequence and evolution of guinea-pig alpha-satellite DNA.

Authors:  E M Southern
Journal:  Nature       Date:  1970-08-22       Impact factor: 49.962

2.  A new method for the large scale purification of Escherichia coli deoxyribonucleic acid-dependent ribonucleic acid polymerase.

Authors:  R R Burgess
Journal:  J Biol Chem       Date:  1969-11-25       Impact factor: 5.157

3.  Repeated sequences in DNA. Hundreds of thousands of copies of DNA sequences have been incorporated into the genomes of higher organisms.

Authors:  R J Britten; D E Kohne
Journal:  Science       Date:  1968-08-09       Impact factor: 47.728

4.  Practical methods for the routine chemical synthesis of 32P-labelled nucleoside di- and triphosphates.

Authors:  R H Symons
Journal:  Biochim Biophys Acta       Date:  1970

5.  The kinetics of renaturation of DNA.

Authors:  K J Thrower; A R Peacocke
Journal:  Biochim Biophys Acta       Date:  1966-06-22

6.  Satellite DNA's in the kangaroo rat.

Authors:  F T Hatch; J A Mazrimas
Journal:  Biochim Biophys Acta       Date:  1970-11-12

7.  Methylation of DNA in developing sea urchin embryos.

Authors:  P Grippo; M Iaccarino; E Parisi; E Scarano
Journal:  J Mol Biol       Date:  1968-09-14       Impact factor: 5.469

8.  Nucleotide sequence analysis of an enzymatically synthesized RNA corresponding to the 5'-terminal region of Q beta RNA.

Authors:  M A Billeter; J E Dahlberg; H M Goodman; J Hindley; C Weissmann
Journal:  Cold Spring Harb Symp Quant Biol       Date:  1969

9.  Nucleotide sequence repetition: a rapidly reassociating fraction of mouse DNA.

Authors:  M Waring; R J Britten
Journal:  Science       Date:  1966-11-11       Impact factor: 47.728

10.  Nucleotide sequencing of DNA: preliminary characterization of the products of specific cleavages at guanine, cytosine, or adenine residues (bacteriophage M13-ribosubstitution-DNA polymerase I-electrophoresis-two-dimensional fingerprinting).

Authors:  W Salser; K Fry; C Brunk; R Poon
Journal:  Proc Natl Acad Sci U S A       Date:  1972-01       Impact factor: 11.205
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  16 in total

1.  The organization of interphase chromatin in drosophilidae: the self adhesion of chromatin containing the same DNA sequences.

Authors:  J E Mayfield; J R Ellison
Journal:  Chromosoma       Date:  1975-09-15       Impact factor: 4.316

2.  5-methylcytosine in heterochromatic regions of chromosomes in Bovidae.

Authors:  W Schnedl; B F Erlanger; O J Miller
Journal:  Hum Genet       Date:  1976-01-28       Impact factor: 4.132

3.  Characteristics of nuclear DNA in the genus Oryza.

Authors:  G A Iyengar; J P Gaddipati; S K Sen
Journal:  Theor Appl Genet       Date:  1979-09       Impact factor: 5.699

4.  Conformations of satellite DNAs.

Authors:  E Selsing; A G Leslie; S Arnott; J G Gall; D M Skinner; E M Southern; J H Spencer; K Harbers
Journal:  Nucleic Acids Res       Date:  1976-10       Impact factor: 16.971

5.  Deoxysubstitution in RNA by RNA polymerase in vitro: a new approach to nucleotide sequence determinations.

Authors:  G V Paddock; H C Heindell; W Salser
Journal:  Proc Natl Acad Sci U S A       Date:  1974-12       Impact factor: 11.205

6.  Genome size and the proportion of repeated nucleotide sequence DNA in plants.

Authors:  R B Flavell; M D Bennett; J B Smith; D B Smith
Journal:  Biochem Genet       Date:  1974-10       Impact factor: 1.890

7.  5-Methylcytosine in heterochromatic regions of chromosomes: chimpanzee and gorilla compared to the human.

Authors:  W Schnedl; V G Dev; R Tantravahi; D A Miller; B F Erlanger; O J Miller
Journal:  Chromosoma       Date:  1975-09-15       Impact factor: 4.316

8.  Analysis of the frequency of sister chromatid exchange in different regions of chromosomes of the kangaroo rat (Dipodomys ordii).

Authors:  C J Bostock; S Christie
Journal:  Chromosoma       Date:  1976-07-08       Impact factor: 4.316

9.  Satellite DNA in the kangaroo Macropus rufogriseus.

Authors:  P Dunsmuir
Journal:  Chromosoma       Date:  1976-06-30       Impact factor: 4.316

10.  Novel properties of satellite DNA from muskmelon.

Authors:  A J Bendich; R S Anderson
Journal:  Proc Natl Acad Sci U S A       Date:  1974-04       Impact factor: 11.205
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