Literature DB >> 4263005

Dissipative structures for an allosteric model. Application to glycolytic oscillations.

A Goldbeter, R Lefever.   

Abstract

An allosteric model of an open monosubstrate enzyme reaction is analyzed for the case where the enzyme, containing two protomers, is activated by the product. It is shown that this system can lead to instabilities beyond which a new state organized in time or in space (dissipative structure) can be reached. The conditions for both types of instabilities are presented and the occurrence of a temporal structure, consisting of a limit cycle behavior, is determined numerically as a function of the important parameters involved in the system. Sustained oscillations in the product and substrate concentrations are shown to occur for acceptable values of the allosteric and kinetic constants; moreover, they seem to be favored by substrate activation. The model is applied to phosphofructokinase, which is the enzyme chiefly responsible for glycolytic oscillations and which presents the same pattern of regulation as the allosteric enzyme appearing in the model. A qualitative and quantitative agreement is obtained with the experimental observations concerning glycolytic self-oscillations.

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Year:  1972        PMID: 4263005      PMCID: PMC1484224          DOI: 10.1016/S0006-3495(72)86164-2

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  21 in total

1.  Biochemical oscillations in "controlled" systems.

Authors:  M Morales; D McKay
Journal:  Biophys J       Date:  1967-09       Impact factor: 4.033

2.  Fluctuating metabolite levels in yeast cells and extracts, and the control of phosphofructokinase activity in vitro.

Authors:  A Betz; C Moore
Journal:  Arch Biochem Biophys       Date:  1967-05       Impact factor: 4.013

3.  Continuous oscillations in a cell-free extract of S. carlsbergensis.

Authors:  B Hess; K Brand; K Pye
Journal:  Biochem Biophys Res Commun       Date:  1966-04-06       Impact factor: 3.575

4.  Kinetics of the allosteric interactions of phosphofructokinase from Escherichia coli.

Authors:  D Blangy; H Buc; J Monod
Journal:  J Mol Biol       Date:  1968-01-14       Impact factor: 5.469

5.  Oscillations of glycolytic intermediates in yeast cells.

Authors:  A Ghosh; B Chance
Journal:  Biochem Biophys Res Commun       Date:  1964-06-01       Impact factor: 3.575

6.  Sustained oscillations in a lactoperoxidase. NADPH and O2 system.

Authors:  S Nakamura; K Yokota; I Yamazaki
Journal:  Nature       Date:  1969-05-24       Impact factor: 49.962

7.  Sustained sinusoidal oscillations of reduced pyridine nucleotide in a cell-free extract of Saccharomyces carlsbergensis.

Authors:  K Pye; B Chance
Journal:  Proc Natl Acad Sci U S A       Date:  1966-04       Impact factor: 11.205

8.  Stability of controlled biological systems.

Authors:  C Walter
Journal:  J Theor Biol       Date:  1969-04       Impact factor: 2.691

9.  Oscillatory behavior in enzymatic control processes.

Authors:  B C Goodwin
Journal:  Adv Enzyme Regul       Date:  1965

10.  Autogenous cellular periodicities as (a) temporal templates and (b) the basis of "morphogenetic fields".

Authors:  C H Waddington
Journal:  J Theor Biol       Date:  1965-03       Impact factor: 2.691

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  65 in total

1.  Generalization of the theory of transition times in metabolic pathways: a geometrical approach.

Authors:  M Lloréns; J C Nuño; Y Rodríguez; E Meléndez-Hevia; F Montero
Journal:  Biophys J       Date:  1999-07       Impact factor: 4.033

2.  How yeast cells synchronize their glycolytic oscillations: a perturbation analytic treatment.

Authors:  M Bier; B M Bakker; H V Westerhoff
Journal:  Biophys J       Date:  2000-03       Impact factor: 4.033

3.  Effect of cellular interaction on glycolytic oscillations in yeast: a theoretical investigation.

Authors:  J Wolf; R Heinrich
Journal:  Biochem J       Date:  2000-01-15       Impact factor: 3.857

4.  Control analysis for autonomously oscillating biochemical networks.

Authors:  Karin A Reijenga; Hans V Westerhoff; Boris N Kholodenko; Jacky L Snoep
Journal:  Biophys J       Date:  2002-01       Impact factor: 4.033

5.  Solutions to systems of nonlinear reaction-diffusion equations.

Authors:  G Rosen
Journal:  Bull Math Biol       Date:  1975-06       Impact factor: 1.758

6.  Unraveling the complex regulatory relationships between metabolism and signal transduction in cancer.

Authors:  Michelle L Wynn; Sofia D Merajver; Santiago Schnell
Journal:  Adv Exp Med Biol       Date:  2012       Impact factor: 2.622

7.  Cell population modelling of yeast glycolytic oscillations.

Authors:  Michael A Henson; Dirk Müller; Matthias Reuss
Journal:  Biochem J       Date:  2002-12-01       Impact factor: 3.857

8.  Patterns of spatiotemporal organization in an "ambiquitous" enzyme model.

Authors:  P Marmillot; J F Hervagault; G R Welch
Journal:  Proc Natl Acad Sci U S A       Date:  1992-12-15       Impact factor: 11.205

9.  Control of glycolytic oscillations by temperature.

Authors:  Thomas Mair; Christian Warnke; Kinko Tsuji; Stefan C Müller
Journal:  Biophys J       Date:  2004-10-15       Impact factor: 4.033

10.  Analysis of rapid oscillations of glucose and free fatty acids in plasma.

Authors:  V Brodan; M Hájek; E Kuhn; M Andĕl
Journal:  Eur J Appl Physiol Occup Physiol       Date:  1979-07-02
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