Literature DB >> 4000941

Biotin-labeled synthetic oligodeoxyribonucleotides: chemical synthesis and uses as hybridization probes.

A Chollet, E H Kawashima.   

Abstract

Oligodeoxynucleotides have been selectively labeled with biotin at their 5'-termini through an aminoalkylphosphoramide linker arm by an efficient chemical method. The reactions were performed in aqueous solution on unprotected oligonucleotides and were insensitive of the sequence and length of the oligonucleotide. 5'-biotin-labeled oligonucleotides were hybridized to dot, Southern and genomic blots of target plasmid DNA immobilized on nitrocellulose filters. Detection level is about 2 fmole. There is no noticeable disturbance of the strength and selectivity of hybridization of the 5'-biotin-labeled probes in comparison with non-modified DNA.

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Year:  1985        PMID: 4000941      PMCID: PMC341094          DOI: 10.1093/nar/13.5.1529

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  17 in total

1.  Chain length determination of small double- and single-stranded DNA molecules by polyacrylamide gel electrophoresis.

Authors:  T Maniatis; A Jeffrey; H van deSande
Journal:  Biochemistry       Date:  1975-08-26       Impact factor: 3.162

2.  AVIDIN. 1. THE USE OF (14-C)BIOTIN FOR KINETIC STUDIES AND FOR ASSAY.

Authors:  N M GREEN
Journal:  Biochem J       Date:  1963-12       Impact factor: 3.857

3.  Detection of specific sequences among DNA fragments separated by gel electrophoresis.

Authors:  E M Southern
Journal:  J Mol Biol       Date:  1975-11-05       Impact factor: 5.469

4.  Gene mapping and gene enrichment by the avidin-biotin interaction: use of cytochrome-c as a polyamine bridge.

Authors:  A Sodja; N Davidson
Journal:  Nucleic Acids Res       Date:  1978-02       Impact factor: 16.971

5.  Studies on polynucleotides. 118. A further study of ribonucleotide incorporation into deoxyribonucleic acid chains by deoxyribonucleic acid polymerase I of Escherichia coli.

Authors:  J H Van de Sande; P C Loewen; H G Khorana
Journal:  J Biol Chem       Date:  1972-10-10       Impact factor: 5.157

6.  An alternate method for synthesis of double-stranded DNA segments.

Authors:  J J Rossi; R Kierzek; T Huang; P A Walker; K Itakura
Journal:  J Biol Chem       Date:  1982-08-25       Impact factor: 5.157

7.  The use of the avidin-biotin complex as a tool in molecular biology.

Authors:  E A Bayer; M Wilchek
Journal:  Methods Biochem Anal       Date:  1980

8.  Electron microscopic visualization of tRNA genes with ferritin-avidin: biotin labels.

Authors:  T R Broker; L M Angerer; P H Yen; N D Hershey; N Davidson
Journal:  Nucleic Acids Res       Date:  1978-02       Impact factor: 16.971

9.  Actin gene expression visualized in chicken muscle tissue culture by using in situ hybridization with a biotinated nucleotide analog.

Authors:  R H Singer; D C Ward
Journal:  Proc Natl Acad Sci U S A       Date:  1982-12       Impact factor: 11.205

10.  Enzymatic synthesis of biotin-labeled polynucleotides: novel nucleic acid affinity probes.

Authors:  P R Langer; A A Waldrop; D C Ward
Journal:  Proc Natl Acad Sci U S A       Date:  1981-11       Impact factor: 11.205

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  33 in total

1.  DNA containing the base analogue 2-aminoadenine: preparation, use as hybridization probes and cleavage by restriction endonucleases.

Authors:  A Chollet; E Kawashima
Journal:  Nucleic Acids Res       Date:  1988-01-11       Impact factor: 16.971

2.  The preparation and application of functionalised synthetic oligonucleotides: III. Use of H-phosphonate derivatives of protected amino-hexanol and mercapto-propanol or -hexanol.

Authors:  N D Sinha; R M Cook
Journal:  Nucleic Acids Res       Date:  1988-03-25       Impact factor: 16.971

3.  Mutant profiles of selectable genetic elements.

Authors:  H Wurst; F M Pohl
Journal:  Proc Natl Acad Sci U S A       Date:  1991-11-15       Impact factor: 11.205

Review 4.  Diagnostic deoxyribonucleic acid probes for infectious diseases.

Authors:  F C Tenover
Journal:  Clin Microbiol Rev       Date:  1988-01       Impact factor: 26.132

5.  A general method for the synthesis of 3'-sulfhydryl and phosphate group containing oligonucleotides.

Authors:  K C Gupta; P Sharma; P Kumar; S Sathyanarayana
Journal:  Nucleic Acids Res       Date:  1991-06-11       Impact factor: 16.971

6.  Preparation and characterization of biotinylated psoralen.

Authors:  W A Saffran; J T Welsh; R M Knobler; F P Gasparro; C R Cantor; R L Edelson
Journal:  Nucleic Acids Res       Date:  1988-08-11       Impact factor: 16.971

7.  The synthesis of protected 5'-amino-2',5'-dideoxyribonucleoside-3'-O-phosphoramidites; applications of 5'-amino-oligodeoxyribonucleotides.

Authors:  B S Sproat; B Beijer; P Rider
Journal:  Nucleic Acids Res       Date:  1987-08-11       Impact factor: 16.971

8.  Oligonucleotides, part 5+: synthesis and fluorescence studies of DNA oligomers d(AT)5 containing adenines covalently linked at C-8 with dansyl fluorophore.

Authors:  D Singh; V Kumar; K N Ganesh
Journal:  Nucleic Acids Res       Date:  1990-06-11       Impact factor: 16.971

9.  Synthesis and hybridization of a series of biotinylated oligonucleotides.

Authors:  A F Cook; E Vuocolo; C L Brakel
Journal:  Nucleic Acids Res       Date:  1988-05-11       Impact factor: 16.971

10.  Comparison of 3' and 5' biotin labelled oligonucleotides for in situ hybridisation.

Authors:  P G Bardin; M A Pickett; S B Robinson; G Sanderson; S T Holgate; S L Johnston
Journal:  Histochemistry       Date:  1993-11
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