Literature DB >> 3995016

Nanosecond fluctuations of the molecular backbone of collagen in hard and soft tissues: a carbon-13 nuclear magnetic resonance relaxation study.

S K Sarkar, C E Sullivan, D A Torchia.   

Abstract

We have determined the amplitude of nanosecond fluctuations of the collagen azimuthal orientation in intact tissues and reconstituted fibers from an analysis of 13C NMR relaxation data. We have labeled intact rat calvaria and tibia collagen (mineralized and cross-linked), intact rat tail tendon and demineralized bone collagen (cross-linked), and reconstituted lathyritic (non-cross-linked) chick calvaria collagen with [2-13C]glycine. This label was chosen because one-third of the amino acid residues in collagen are glycine and because the 1H-13C dipolar coupling is the dominant relaxation mechanism. Spin-lattice relaxation times (T1) and nuclear Overhauser enhancements were measured at 15.09 and 62.98 MHz at 22 and -35 degrees C. The measured NMR parameters have been analyzed by using a dynamic model in which the azimuthal orientation of the molecule fluctuates as a consequence of reorientation about the axis of the triple helix. We have shown that if root mean square fluctuations in the azimuthal orientations are small, gamma rms much less than 1 rad, the correlation function decays with a single correlation time tau and T1 depends only upon tau and gamma rms and not the detailed model of motion. Our analysis shows that, at 22 degrees C, tau is in the 1-5-ns range for all samples and gamma rms is 10 degrees, 9 degrees, and 5.5 degrees for the non-cross-linked, cross-linked, and mineralized samples, respectively. At -35 degrees C, gamma rms is less than 3 degrees for all samples. These results show that mineral and low temperature significantly restrict the amplitude of nanosecond motions of the collagen backbone.(ABSTRACT TRUNCATED AT 250 WORDS)

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Year:  1985        PMID: 3995016     DOI: 10.1021/bi00330a033

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  6 in total

1.  Evidence that collagen fibrils in tendons are inhomogeneously structured in a tubelike manner.

Authors:  Thomas Gutsmann; Georg E Fantner; Manuela Venturoni; Axel Ekani-Nkodo; James B Thompson; Johannes H Kindt; Daniel E Morse; Deborah Kuchnir Fygenson; Paul K Hansma
Journal:  Biophys J       Date:  2003-04       Impact factor: 4.033

Review 2.  Chemical shift tensor - the heart of NMR: Insights into biological aspects of proteins.

Authors:  Hazime Saitô; Isao Ando; Ayyalusamy Ramamoorthy
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2010-05-07       Impact factor: 9.795

3.  Interpreting the equatorial diffraction pattern of collagenous tissues in the light of molecular motion.

Authors:  S Lees
Journal:  Biophys J       Date:  1998-08       Impact factor: 4.033

4.  Proline provides site-specific flexibility for in vivo collagen.

Authors:  Wing Ying Chow; Chris J Forman; Dominique Bihan; Anna M Puszkarska; Rakesh Rajan; David G Reid; David A Slatter; Lucy J Colwell; David J Wales; Richard W Farndale; Melinda J Duer
Journal:  Sci Rep       Date:  2018-09-14       Impact factor: 4.379

5.  Preparation of highly and generally enriched mammalian tissues for solid state NMR.

Authors:  Veronica Wai Ching Wong; David G Reid; Wing Ying Chow; Rakesh Rajan; Maggie Green; Roger A Brooks; Melinda J Duer
Journal:  J Biomol NMR       Date:  2015-09-25       Impact factor: 2.835

Review 6.  New methods to study the composition and structure of the extracellular matrix in natural and bioengineered tissues.

Authors:  Jürgen Schiller; Daniel Huster
Journal:  Biomatter       Date:  2012 Jul-Sep
  6 in total

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