Literature DB >> 3856839

The NADPH binding site on beef liver catalase.

I Fita, M G Rossmann.   

Abstract

Beef liver and human erythrocyte catalases (EC 1.11.1.6) bind NADP tenaciously [Kirkman, H. N. & Gaetani, G. F. (1984) Proc. Natl. Acad. Sci. USA 81, 4343-4348]. The position of NADP on beef liver catalase corresponds to the carboxyl-terminal polypeptide hinge in Penicillium vitale fungal catalase, which connects the common catalase structure to the additional flavodoxin-like domain. In contrast to nearly all other known structures of protein-bound NADP, NAD, and FAD, the NADP molecule of beef liver catalase is folded into a right-handed helix and bound, in part, in the vicinity of the carboxyl end of two alpha-helices. A water molecule (W7) occupies a pseudosubstrate site close to the C4 position of the nicotinamide and is hydrogen bonded to His-304. Although the NADP and heme groups approach each other to within 13.7 A, there is no direct interaction. The function of the NADP remains a mystery.

Entities:  

Mesh:

Substances:

Year:  1985        PMID: 3856839      PMCID: PMC397320          DOI: 10.1073/pnas.82.6.1604

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  31 in total

1.  Studies of asymmetry in the three-dimensional structure of lobster D-glyceraldehyde-3-phosphate dehydrogenase.

Authors:  D Moras; K W Olsen; M N Sabesan; M Buehner; G C Ford; M G Rossmann
Journal:  J Biol Chem       Date:  1975-12-10       Impact factor: 5.157

2.  The conformation of adenosine diphosphoribose and 8-bromoadenosine diphosphoribose when bound to liver alcohol dehydrogenase.

Authors:  M A Abdallah; J F Biellmann; B Nordström; C I Brändén
Journal:  Eur J Biochem       Date:  1975-01-15

3.  Chemical and biological evolution of nucleotide-binding protein.

Authors:  M G Rossmann; D Moras; K W Olsen
Journal:  Nature       Date:  1974-07-19       Impact factor: 49.962

4.  Conformation of nicotinamide adenine dinucleotide bound to cytoplasmic malate dehydrogenase.

Authors:  L E Webb; E J Hill; L J Banaszak
Journal:  Biochemistry       Date:  1973-12-04       Impact factor: 3.162

5.  Conformation of coenzyme fragments when bound to lactate dehydrogenase.

Authors:  K Chandrasekhar; A McPherson; M J Adams; M G Rossmann
Journal:  J Mol Biol       Date:  1973-06-05       Impact factor: 5.469

6.  Structural and functional similarities within the coenzyme binding domains of dehydrogenases.

Authors:  I Ohlsson; B Nordström; C I Brändén
Journal:  J Mol Biol       Date:  1974-10-25       Impact factor: 5.469

7.  Nuclear magnetic resonance study of the conformation of nicotinamide--adenine dinucleotide and reduced nicotinamide--adenine dinucleotide in solution.

Authors:  W A Catterall; D P Hollis; C F Walter
Journal:  Biochemistry       Date:  1969-10       Impact factor: 3.162

8.  Comparison of super-secondary structures in proteins.

Authors:  S T Rao; M G Rossmann
Journal:  J Mol Biol       Date:  1973-05-15       Impact factor: 5.469

9.  Conservation of conformation in mono and poly-nucleotides.

Authors:  S Arnott; D W Hukins
Journal:  Nature       Date:  1969-11-29       Impact factor: 49.962

10.  Natural abundance 13C nuclear magnetic resonance spectra of nicotinamide adenine dinucleotide and related nucleotides.

Authors:  M Blumenstein; M A Raftery
Journal:  Biochemistry       Date:  1973-09-11       Impact factor: 3.162

View more
  40 in total

Review 1.  3D domain swapping: as domains continue to swap.

Authors:  Yanshun Liu; David Eisenberg
Journal:  Protein Sci       Date:  2002-06       Impact factor: 6.725

2.  Structural analysis of NADPH depleted bovine liver catalase and its inhibitor complexes.

Authors:  Ragumani Sugadev; M N Ponnuswamy; K Sekar
Journal:  Int J Biochem Mol Biol       Date:  2011-01-29

3.  Structure of a bacterial enzyme regulated by phosphorylation, isocitrate dehydrogenase.

Authors:  J H Hurley; P E Thorsness; V Ramalingam; N H Helmers; D E Koshland; R M Stroud
Journal:  Proc Natl Acad Sci U S A       Date:  1989-11       Impact factor: 11.205

4.  Effect of proximal ligand substitutions on the carbene and nitrene transferase activity of myoglobin.

Authors:  Eric J Moore; Rudi Fasan
Journal:  Tetrahedron       Date:  2019-03-11       Impact factor: 2.457

5.  Loop anchor modification causes the population of an alternative native state in an SH3-like domain.

Authors:  Jane A Knappenberger; Juliette T J Lecomte
Journal:  Protein Sci       Date:  2007-05       Impact factor: 6.725

6.  Nucleotide sequence of Escherichia coli katE, which encodes catalase HPII.

Authors:  I von Ossowski; M R Mulvey; P A Leco; A Borys; P C Loewen
Journal:  J Bacteriol       Date:  1991-01       Impact factor: 3.490

Review 7.  Human catalase: looking for complete identity.

Authors:  Madhur M Goyal; Anjan Basak
Journal:  Protein Cell       Date:  2010-11-09       Impact factor: 14.870

8.  A peroxide/ascorbate-inducible catalase from Haemophilus influenzae is homologous to the Escherichia coli katE gene product.

Authors:  W R Bishai; H O Smith; G J Barcak
Journal:  J Bacteriol       Date:  1994-05       Impact factor: 3.490

9.  Heme-protein fission under nondenaturing conditions.

Authors:  M L Smith; J Paul; P I Ohlsson; K Hjortsberg; K G Paul
Journal:  Proc Natl Acad Sci U S A       Date:  1991-02-01       Impact factor: 11.205

10.  Theoretical study of model compound I complexes of horseradish peroxidase and catalase.

Authors:  P Du; G H Loew
Journal:  Biophys J       Date:  1995-01       Impact factor: 4.033

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.