Literature DB >> 3839306

Analysis of repetitive sequence elements containing tRNA-like sequences.

C B Lawrence, D P McDonnell, W J Ramsey.   

Abstract

Several repetitive sequence elements from diverse species share extensive sequence homology with tRNA molecules. Analysis of the tRNA-like sequences within these elements suggest that they have originated from authentic tRNA sequences. Elements containing tRNA-like sequences can be divided into three distinct groups whose members share extensive sequence homology, have similar sequence organization and have unique species distribution. We suggest that these three groups represent independent examples of retroposon families that have originated from tRNAs.

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Year:  1985        PMID： 3839306      PMCID： PMC321785          DOI： 10.1093/nar/13.12.4239

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


  15 in total

1.  Identifier sequences are transcribed specifically in brain.

Authors:  J G Sutcliffe; R J Milner; J M Gottesfeld; R A Lerner
Journal:  Nature       Date:  1984 Mar 15-21       Impact factor: 49.962

2.  Retroposons defined.

Authors:  J Rogers
Journal:  Nature       Date:  1983-02-10       Impact factor: 49.962

3.  A family of repeated DNA sequences, one of which resides in the second intervening sequence of the mouse dihydrofolate reductase gene.

Authors:  J E Feagin; D R Setzer; R T Schimke
Journal:  J Biol Chem       Date:  1983-02-25       Impact factor: 5.157

4.  Direct repeats flank three small nuclear RNA pseudogenes in the human genome.

Authors:  S W Van Arsdell; R A Denison; L B Bernstein; A M Weiner; T Manser; R F Gesteland
Journal:  Cell       Date:  1981-10       Impact factor: 41.582

5.  Structure and evolution of goat gamma-, beta C- and beta A-globin genes: three developmentally regulated genes contain inserted elements.

Authors:  E A Schon; M L Cleary; J R Haynes; J B Lingrel
Journal:  Cell       Date:  1981-12       Impact factor: 41.582

6.  An interactive graphics program for comparing and aligning nucleic acid and amino acid sequences.

Authors:  R Staden
Journal:  Nucleic Acids Res       Date:  1982-05-11       Impact factor: 16.971

7.  Unusual alpha-globin-like gene that has cleanly lost both globin intervening sequences.

Authors:  Y Nishioka; A Leder; P Leder
Journal:  Proc Natl Acad Sci U S A       Date:  1980-05       Impact factor: 11.205

8.  Similar amino acid sequences: chance or common ancestry?

Authors:  R F Doolittle
Journal:  Science       Date:  1981-10-09       Impact factor: 47.728

9.  Brain-specific genes have identifier sequences in their introns.

Authors:  R J Milner; F E Bloom; C Lai; R A Lerner; J G Sutcliffe
Journal:  Proc Natl Acad Sci U S A       Date:  1984-02       Impact factor: 11.205

10.  Rapid similarity searches of nucleic acid and protein data banks.

Authors:  W J Wilbur; D J Lipman
Journal:  Proc Natl Acad Sci U S A       Date:  1983-02       Impact factor: 11.205
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  28 in total

1.  Solving the riddle of codon usage preferences: a test for translational selection.

Authors:  Mario dos Reis; Renos Savva; Lorenz Wernisch
Journal:  Nucleic Acids Res       Date:  2004-09-24       Impact factor: 16.971

2.  Transfer RNA-like structure of the human Alu family: implications of its generation mechanism and possible functions.

Authors:  N Okada
Journal:  J Mol Evol       Date:  1990-12       Impact factor: 2.395

3.  Shaping and reshaping of salmonid genomes by amplification of tRNA-derived retroposons during evolution.

Authors:  Y Kido; M Aono; T Yamaki; K Matsumoto; S Murata; M Saneyoshi; N Okada
Journal:  Proc Natl Acad Sci U S A       Date:  1991-03-15       Impact factor: 11.205

4.  Neural BC1 RNA: cDNA clones reveal nonrepetitive sequence content.

Authors:  T M DeChiara; J Brosius
Journal:  Proc Natl Acad Sci U S A       Date:  1987-05       Impact factor: 11.205

5.  Expression of small cytoplasmic transcripts of the rat identifier element in vivo and in cultured cells.

Authors:  R D McKinnon; P Danielson; M A Brow; F E Bloom; J G Sutcliffe
Journal:  Mol Cell Biol       Date:  1987-06       Impact factor: 4.272

6.  Stable accumulation of a rat truncated repeat transcript in Xenopus oocytes.

Authors:  A Gutierrez-Hartmann; J D Baxter
Journal:  Proc Natl Acad Sci U S A       Date:  1986-05       Impact factor: 11.205

7.  Centromeric polymerase III transcription units in Chironomus pallidivittatus.

Authors:  C Rovira; J E Edström
Journal:  Nucleic Acids Res       Date:  1996-05-01       Impact factor: 16.971

8.  Details of retropositional genome dynamics that provide a rationale for a generic division: the distinct branching of all the pacific salmon and trout (Oncorhynchus) from the Atlantic salmon and trout (Salmo).

Authors:  S Murata; N Takasaki; M Saitoh; H Tachida; N Okada
Journal:  Genetics       Date:  1996-03       Impact factor: 4.562

9.  tRNA derived insertion element in histone gene repeating unit of Drosophila melanogaster.

Authors:  Y Matsuo; T Yamazaki
Journal:  Nucleic Acids Res       Date:  1989-01-11       Impact factor: 16.971

10.  A sequence similar to tRNA 3 Lys gene is embedded in HIV-1 U3-R and promotes minus-strand transfer.

Authors:  Dorota Piekna-Przybylska; Laura DiChiacchio; David H Mathews; Robert A Bambara
Journal:  Nat Struct Mol Biol       Date:  2009-12-06       Impact factor: 15.369
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