Literature DB >> 3755389

The expression of the evolutionarily conserved GATA/GACA repeats in mouse tissues.

R Schäfer, E Böltz, A Becker, F Bartels, J T Epplen.   

Abstract

Simple repeated GATA and GACA sequences were initially identified in sex-specific snake satellite DNA. The organization of these sequences in the mouse genome is described in Schäfer et al. 1986. The expression of these simple repeats was studied here in several mouse tissues using a variety of different probes: oligonucleotides and "single-stranded" as well as nick-translated DNA. The transcription of discrete RNA species was found to be differentially regulated in several organs but sex differences in transcription were not observed. GATA- and GACA-containing cDNA clones were isolated and sequenced and a genomic clone was characterized with respect to the transcription of GATA flanking sequences. Functional aspects of GATCA simple DNA repeats are discussed in terms of internally repetitive, hydrophobic translation products.

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Year:  1986        PMID： 3755389     DOI： 10.1007/bf00386790

Source DB:  PubMed          Journal:  Chromosoma        ISSN： 0009-5915            Impact factor:   4.316


  16 in total

1.  Filter replicas and permanent collections of recombinant DNA plasmids.

Authors:  J P Gergen; R H Stern; P C Wensink
Journal:  Nucleic Acids Res       Date:  1979-12-20       Impact factor: 16.971

2.  Labeling deoxyribonucleic acid to high specific activity in vitro by nick translation with DNA polymerase I.

Authors:  P W Rigby; M Dieckmann; C Rhodes; P Berg
Journal:  J Mol Biol       Date:  1977-06-15       Impact factor: 5.469

3.  The organization of the evolutionarily conserved GATA/GACA repeats in the mouse genome.

Authors:  R Schäfer; S Ali; J T Epplen
Journal:  Chromosoma       Date:  1986       Impact factor: 4.316

4.  Regulation of gene expression: possible role of repetitive sequences.

Authors:  E H Davidson; R J Britten
Journal:  Science       Date:  1979-06-08       Impact factor: 47.728

5.  Hybridization of denatured RNA and small DNA fragments transferred to nitrocellulose.

Authors:  P S Thomas
Journal:  Proc Natl Acad Sci U S A       Date:  1980-09       Impact factor: 11.205

6.  Hybridization of nucleic acids directly in agarose gels.

Authors:  S G Tsao; C F Brunk; R E Pearlman
Journal:  Anal Biochem       Date:  1983-06       Impact factor: 3.365

7.  Conserved sex-chromosome-associated nucleotide sequences in eukaryotes.

Authors:  L Singh; I F Purdom; K W Jones
Journal:  Cold Spring Harb Symp Quant Biol       Date:  1981

8.  Repeated DNA still in search of a function.

Authors:  R Lewin
Journal:  Science       Date:  1982-08-13       Impact factor: 47.728

Review 9.  On evolutionarily conserved simple repetitive DNA sequences: do "sex-specific" satellite components serve any sequence dependent function?

Authors:  J T Epple; A Cellini; M Shorte; S Ohno
Journal:  Differentiation       Date:  1983       Impact factor: 3.880

10.  The conserved nucleotide sequences of Bkm, which define Sxr in the mouse, are transcribed.

Authors:  L Singh; C Phillips; K W Jones
Journal:  Cell       Date:  1984-01       Impact factor: 41.582
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  19 in total

1.  A genetic map of the mouse suitable for typing intraspecific crosses.

Authors:  W Dietrich; H Katz; S E Lincoln; H S Shin; J Friedman; N C Dracopoli; E S Lander
Journal:  Genetics       Date:  1992-06       Impact factor: 4.562

2.  Nucleotide sequence analysis of a mouse Y chromosomal DNA fragment containing Bkm and LINE elements.

Authors:  Y Nishioka; B M Dolan; A Fiorellino; V F Prado
Journal:  Genetica       Date:  1992       Impact factor: 1.082

3.  GATA repeats in the genome of Asellus aquaticus (Crustacea, Isopoda).

Authors:  F Pelliccia; M Di Castro; V Lanza; E V Volpi; A Rocchi
Journal:  Chromosoma       Date:  1991-03       Impact factor: 4.316

4.  Hypervariability of intronic simple (gt)n(ga)m repeats in HLA-DRB genes.

Authors:  O Riess; C Kammerbauer; L Roewer; V Steimle; A Andreas; E Albert; T Nagai; J T Epplen
Journal:  Immunogenetics       Date:  1990       Impact factor: 2.846

Review 5.  Potential genetic functions of tandem repeated DNA sequence blocks in the human genome are based on a highly conserved "chromatin folding code".

Authors:  P Vogt
Journal:  Hum Genet       Date:  1990-03       Impact factor: 4.132

6.  Amplification of DNA markers from evolutionarily diverse genomes using single primers of simple-sequence repeats.

Authors:  M Gupta; Y S Chyi; J Romero-Severson; J L Owen
Journal:  Theor Appl Genet       Date:  1994-12       Impact factor: 5.699

7.  Clustered GATA repeats (Bkm sequences) on the human Y chromosome.

Authors:  J Arnemann; S Jakubiczka; J Schmidtke; R Schäfer; J T Epplen
Journal:  Hum Genet       Date:  1986-08       Impact factor: 4.132

8.  The organization of the evolutionarily conserved GATA/GACA repeats in the mouse genome.

Authors:  R Schäfer; S Ali; J T Epplen
Journal:  Chromosoma       Date:  1986       Impact factor: 4.316

9.  Occurrence of the (GATA)n sequences in vertebrate and invertebrate genomes.

Authors:  G L Miklos; K I Matthaei; K C Reed
Journal:  Chromosoma       Date:  1989-09       Impact factor: 4.316

10.  A human Y-chromosomal DNA sequence expressed in testicular tissue.

Authors:  J Arnemann; J T Epplen; H J Cooke; U Sauermann; W Engel; J Schmidtke
Journal:  Nucleic Acids Res       Date:  1987-11-11       Impact factor: 16.971
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