Literature DB >> 3755362

Numerical studies of unreactive contractile networks.

M Dembo, M Maltrud, F Harlow.   

Abstract

We present a finite difference algorithm for integrating the reactive flow model of contractile biological polymer networks on a fixed Eulerian mesh. We discuss the accuracy and limits of the algorithm. To illustrate the application of the algorithm, we carry out a family of computations involving an unreactive contractile network contained in a two-dimensional square reaction vessel. By numerical experiments using different values of the physical parameters of the model, we find that for this simple sort of system two major dynamical modes of contraction are predicted to occur. There is the squeezing type contraction in which the network contracts to a single small clump with gradual expulsion of solution material, and the rending type contraction in which the network tears itself into a number of separate pieces. We find that to a good approximation the transition between the squeezing mode and the rending mode is controlled by a single nondimensional number (the rending number). We discuss the relevance of these results for the analysis of various experimental observations.

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Year:  1986        PMID: 3755362      PMCID: PMC1329665          DOI: 10.1016/S0006-3495(86)83445-2

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  7 in total

1.  The contractile basis of amoeboid movement. V. The control of gelation, solation, and contraction in extracts from Dictyostelium discoideum.

Authors:  J S Condeelis; D L Taylor
Journal:  J Cell Biol       Date:  1977-09       Impact factor: 10.539

2.  Actin-binding protein amplifies actomyosin contraction, and gelsolin confers calcium control on the direction of contraction.

Authors:  O I Stendahl; T P Stossel
Journal:  Biochem Biophys Res Commun       Date:  1980-01-29       Impact factor: 3.575

3.  The role of actin in the temperature-dependent gelation and contraction of extracts of Acanthamoeba.

Authors:  T D Pollard
Journal:  J Cell Biol       Date:  1976-03       Impact factor: 10.539

4.  Interactions of actin, myosin, and a new actin-binding protein of rabbit pulmonary macrophages. II. Role in cytoplasmic movement and phagocytosis.

Authors:  T P Stossel; J H Hartwig
Journal:  J Cell Biol       Date:  1976-03       Impact factor: 10.539

5.  Interconversion of structural and contractile actin gels by insertion of myosin during assembly.

Authors:  R E Kane
Journal:  J Cell Biol       Date:  1983-12       Impact factor: 10.539

6.  Induction of either contractile or structural actin-based gels in sea urchin egg cytoplasmic extract.

Authors:  R E Kane
Journal:  J Cell Biol       Date:  1980-09       Impact factor: 10.539

7.  The contractile basis of ameboid movement. VI. The solation-contraction coupling hypothesis.

Authors:  S B Hellewell; D L Taylor
Journal:  J Cell Biol       Date:  1979-12       Impact factor: 10.539

  7 in total
  7 in total

1.  Multiphase flow models of biogels from crawling cells to bacterial biofilms.

Authors:  N G Cogan; Robert D Guy
Journal:  HFSP J       Date:  2010-02-12

Review 2.  Leukocyte biophysics. An invited review.

Authors:  G W Schmid-Schönbein
Journal:  Cell Biophys       Date:  1990-10

3.  The fundamental motor of the human neutrophil is not random: evidence for local non-Markov movement in neutrophils.

Authors:  R S Hartman; K Lau; W Chou; T D Coates
Journal:  Biophys J       Date:  1994-12       Impact factor: 4.033

4.  Stochastic model of receptor-mediated cytomechanics and dynamic morphology of leukocytes.

Authors:  R T Tranquillo; W Alt
Journal:  J Math Biol       Date:  1996       Impact factor: 2.259

5.  A conservative algorithm for parabolic problems in domains with moving boundaries.

Authors:  Igor L Novak; Boris M Slepchenko
Journal:  J Comput Phys       Date:  2014-08-01       Impact factor: 3.553

6.  The mechanics of motility in dissociated cytoplasm.

Authors:  M Dembo
Journal:  Biophys J       Date:  1986-12       Impact factor: 4.033

7.  Mechanics and control of the cytoskeleton in Amoeba proteus.

Authors:  M Dembo
Journal:  Biophys J       Date:  1989-06       Impact factor: 4.033

  7 in total

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