Literature DB >> 3754960

A cDNA clone of the hnRNP C proteins and its homology with the single-stranded DNA binding protein UP2.

D K Lahiri, J O Thomas.   

Abstract

A cDNA clone which expresses a protein that cross-reacts immunologically with the human C1 and C2 hnRNP core proteins has been isolated. The clone was selected by a sensitive immunochemical assay employing an avidin-biotin complex for detection, and identified as a clone for the hnRNP C proteins by a highly sensitive antibody select assay that is described here. The clone contains 677 nucleotides, and, as shown by northern blotting, is derived from a 1.5 Kb poly(A)+ mRNA. There are regions of strong homology between the human and mouse genes, weak homology is seen with chicken DNA, and very little, if any, homology can be detected with Drosophila, Artemia, sea urchin, or yeast DNAs. Two peptides (a total of 24 amino acids) of the calf thymus single-stranded DNA binding protein UP2 show perfect homology with the deduced amino acid sequence of the clone, suggesting that UP2 is related to the hnRNP C proteins. There is also a region that has a sequence very similar to two regions of the single-stranded DNA binding protein UP1 that contain proposed DNA binding sites.

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Year:  1986        PMID: 3754960      PMCID: PMC339847          DOI: 10.1093/nar/14.10.4077

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  30 in total

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Authors:  G Herrick; H Delius; B Alberts
Journal:  J Biol Chem       Date:  1976-04-10       Impact factor: 5.157

2.  A single-stranded nucleic acid-binding protein from Artemia salina. II. Interaction with nucleic acids.

Authors:  L Nowak; D K Marvil; J O Thomas; M Boublik; W Szer
Journal:  J Biol Chem       Date:  1980-07-10       Impact factor: 5.157

3.  A single-stranded nucleic acid-binding protein from Artemia salina. I. Purification and characterization.

Authors:  D K Marvil; L Nowak; W Szer
Journal:  J Biol Chem       Date:  1980-07-10       Impact factor: 5.157

4.  Identification and characterization of the packaging proteins of core 40S hnRNP particles.

Authors:  A L Beyer; M E Christensen; B W Walker; W M LeStourgeon
Journal:  Cell       Date:  1977-05       Impact factor: 41.582

5.  Electrophoretic transfer of proteins from polyacrylamide gels to nitrocellulose sheets: procedure and some applications.

Authors:  H Towbin; T Staehelin; J Gordon
Journal:  Proc Natl Acad Sci U S A       Date:  1979-09       Impact factor: 11.205

6.  Structural organization of nuclear complexes containing DNA-like RNA.

Authors:  O P Samarina; E M Lukanidin; J Molnar; G P Georgiev
Journal:  J Mol Biol       Date:  1968-04-14       Impact factor: 5.469

7.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

8.  Heterogeneous nuclear ribonucleoproteins: role in RNA splicing.

Authors:  Y D Choi; P J Grabowski; P A Sharp; G Dreyfuss
Journal:  Science       Date:  1986-03-28       Impact factor: 47.728

9.  Characterization of glycine-rich proteins from the ribonucleoproteins containing heterogeneous nuclear ribonucleic acid.

Authors:  J P Fuchs; C Judes; M Jacob
Journal:  Biochemistry       Date:  1980-03-18       Impact factor: 3.162

10.  Immunofluorescent localization of the proteins of nuclear ribonucleoprotein complexes.

Authors:  R E Jones; C S Okamura; T E Martin
Journal:  J Cell Biol       Date:  1980-07       Impact factor: 10.539

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  20 in total

Review 1.  U2AF homology motifs: protein recognition in the RRM world.

Authors:  Clara L Kielkopf; Stephan Lücke; Michael R Green
Journal:  Genes Dev       Date:  2004-07-01       Impact factor: 11.361

2.  The NAM8 gene in Saccharomyces cerevisiae encodes a protein with putative RNA binding motifs and acts as a suppressor of mitochondrial splicing deficiencies when overexpressed.

Authors:  K Ekwall; M Kermorgant; G Dujardin; O Groudinsky; P P Slonimski
Journal:  Mol Gen Genet       Date:  1992-05

3.  Isolation and characterization of a Xenopus laevis C protein cDNA: structure and expression of a heterogeneous nuclear ribonucleoprotein core protein.

Authors:  F Preugschat; B Wold
Journal:  Proc Natl Acad Sci U S A       Date:  1988-12       Impact factor: 11.205

4.  Saccharomyces cerevisiae SSB1 protein and its relationship to nucleolar RNA-binding proteins.

Authors:  A Y Jong; M W Clark; M Gilbert; A Oehm; J L Campbell
Journal:  Mol Cell Biol       Date:  1987-08       Impact factor: 4.272

5.  Protein kinase A enhances, whereas glycogen synthase kinase-3 beta inhibits, the activity of the exon 2-encoded transactivator domain of heterogeneous nuclear ribonucleoprotein D in a hierarchical fashion.

Authors:  Mate Tolnay; Yuang-Taung Juang; George C Tsokos
Journal:  Biochem J       Date:  2002-04-01       Impact factor: 3.857

6.  The Ebola virus VP24 protein prevents hnRNP C1/C2 binding to karyopherin α1 and partially alters its nuclear import.

Authors:  Reed S Shabman; Erol E Gulcicek; Kathryn L Stone; Christopher F Basler
Journal:  J Infect Dis       Date:  2011-11       Impact factor: 5.226

7.  Ribonucleoprotein SS-B/La belongs to a protein family with consensus sequences for RNA-binding.

Authors:  E K Chan; K F Sullivan; E M Tan
Journal:  Nucleic Acids Res       Date:  1989-03-25       Impact factor: 16.971

8.  Mutations in the yeast RNA14 and RNA15 genes result in an abnormal mRNA decay rate; sequence analysis reveals an RNA-binding domain in the RNA15 protein.

Authors:  L Minvielle-Sebastia; B Winsor; N Bonneaud; F Lacroute
Journal:  Mol Cell Biol       Date:  1991-06       Impact factor: 4.272

9.  Primary structures of the heterogeneous nuclear ribonucleoprotein A2, B1, and C2 proteins: a diversity of RNA binding proteins is generated by small peptide inserts.

Authors:  C G Burd; M S Swanson; M Görlach; G Dreyfuss
Journal:  Proc Natl Acad Sci U S A       Date:  1989-12       Impact factor: 11.205

10.  Nuclear proteins that bind the pre-mRNA 3' splice site sequence r(UUAG/G) and the human telomeric DNA sequence d(TTAGGG)n.

Authors:  F Ishikawa; M J Matunis; G Dreyfuss; T R Cech
Journal:  Mol Cell Biol       Date:  1993-07       Impact factor: 4.272

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