Literature DB >> 1603056

The NAM8 gene in Saccharomyces cerevisiae encodes a protein with putative RNA binding motifs and acts as a suppressor of mitochondrial splicing deficiencies when overexpressed.

K Ekwall1, M Kermorgant, G Dujardin, O Groudinsky, P P Slonimski.   

Abstract

We have characterized the nuclear gene NAM8 in Saccharomyces cerevisiae. It acts as a suppressor of mitochondrial splicing deficiencies when present on a multicopy plasmid. The suppressed mutations affect RNA folding and are located in both group I and group II introns. The gene is weakly transcribed in wild-type strains, its overexpression is a prerequisite for the suppressor action. Inactivation of the NAM8 gene does not affect cell viability, mitochondrial function or mitochondrial genome stability. The NAM8 gene encodes a protein of 523 amino acids which includes two conserved (RNP) motifs common to RNA-binding proteins from widely different organisms. This homology with RNA-binding proteins, together with the intronic location of the suppressed mitochondrial mutations, suggests that the NAM8 protein could be a non-essential component of the mitochondrial splicing machinery and, when present in increased amounts, it could convert a deficient intron RNA folding pattern into a productive one.

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Year:  1992        PMID: 1603056     DOI: 10.1007/bf00587571

Source DB:  PubMed          Journal:  Mol Gen Genet        ISSN: 0026-8925


  61 in total

1.  Novel class of nuclear genes involved in both mRNA splicing and protein synthesis in Saccharomyces cerevisiae mitochondria.

Authors:  E B Asher; O Groudinsky; G Dujardin; N Altamura; M Kermorgant; P P Slonimski
Journal:  Mol Gen Genet       Date:  1989-02

2.  The generality of self-splicing RNA: relationship to nuclear mRNA splicing.

Authors:  T R Cech
Journal:  Cell       Date:  1986-01-31       Impact factor: 41.582

3.  Saccharomyces cerevisiae SSB1 protein and its relationship to nucleolar RNA-binding proteins.

Authors:  A Y Jong; M W Clark; M Gilbert; A Oehm; J L Campbell
Journal:  Mol Cell Biol       Date:  1987-08       Impact factor: 4.272

4.  Yeast/E. coli shuttle vectors with multiple unique restriction sites.

Authors:  J E Hill; A M Myers; T J Koerner; A Tzagoloff
Journal:  Yeast       Date:  1986-09       Impact factor: 3.239

5.  Isolation of genes by complementation in yeast: molecular cloning of a cell-cycle gene.

Authors:  K A Nasmyth; S I Reed
Journal:  Proc Natl Acad Sci U S A       Date:  1980-04       Impact factor: 11.205

6.  Comparison of fungal mitochondrial introns reveals extensive homologies in RNA secondary structure.

Authors:  F Michel; A Jacquier; B Dujon
Journal:  Biochimie       Date:  1982-10       Impact factor: 4.079

7.  Nucleolin from Xenopus laevis: cDNA cloning and expression during development.

Authors:  M Caizergues-Ferrer; P Mariottini; C Curie; B Lapeyre; N Gas; F Amalric; F Amaldi
Journal:  Genes Dev       Date:  1989-03       Impact factor: 11.361

8.  cDNA cloning of the human U1 snRNA-associated A protein: extensive homology between U1 and U2 snRNP-specific proteins.

Authors:  P T Sillekens; W J Habets; R P Beijer; W J van Venrooij
Journal:  EMBO J       Date:  1987-12-01       Impact factor: 11.598

9.  Three suppressor mutations which cure a mitochondrial RNA maturase deficiency occur at the same codon in the open reading frame of the nuclear NAM2 gene.

Authors:  M Labouesse; C J Herbert; G Dujardin; P P Slonimski
Journal:  EMBO J       Date:  1987-03       Impact factor: 11.598

10.  Identification of the RNA binding segment of human U1 A protein and definition of its binding site on U1 snRNA.

Authors:  D Scherly; W Boelens; W J van Venrooij; N A Dathan; J Hamm; I W Mattaj
Journal:  EMBO J       Date:  1989-12-20       Impact factor: 11.598

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  12 in total

1.  Splicing of the meiosis-specific HOP2 transcript utilizes a unique 5' splice site.

Authors:  J Y Leu; G S Roeder
Journal:  Mol Cell Biol       Date:  1999-12       Impact factor: 4.272

2.  Interaction of the U1 snRNP with nonconserved intronic sequences affects 5' splice site selection.

Authors:  O Puig; A Gottschalk; P Fabrizio; B Séraphin
Journal:  Genes Dev       Date:  1999-03-01       Impact factor: 11.361

3.  Characterization of a gene encoding a DNA-binding protein that interacts in vitro with vascular specific cis elements of the phenylalanine ammonia-lyase promoter.

Authors:  A Séguin; G Laible; A Leyva; R A Dixon; C J Lamb
Journal:  Plant Mol Biol       Date:  1997-10       Impact factor: 4.076

4.  Integration of a splicing regulatory network within the meiotic gene expression program of Saccharomyces cerevisiae.

Authors:  Elizabeth M Munding; A Haller Igel; Lily Shiue; Kristel M Dorighi; Lisa R Treviño; Manuel Ares
Journal:  Genes Dev       Date:  2010-12-01       Impact factor: 11.361

Review 5.  The biology of yeast mitochondrial introns.

Authors:  H J Pel; L A Grivell
Journal:  Mol Biol Rep       Date:  1993-06       Impact factor: 2.316

6.  Genetic and physical interactions involving the yeast nuclear cap-binding complex.

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Journal:  Mol Cell Biol       Date:  1999-10       Impact factor: 4.272

7.  Two adjacent nuclear genes, ISF1 and NAM7/UPF1, cooperatively participate in mitochondrial functions in Saccharomyces cerevisiae.

Authors:  N Altamura; G Dujardin; O Groudinsky; P P Slonimski
Journal:  Mol Gen Genet       Date:  1994-01

8.  The existence of eukaryotic ribonucleoprotein consensus sequence-type RNA-binding proteins in a prokaryote, Synechococcus 6301.

Authors:  M Sugita; M Sugiura
Journal:  Nucleic Acids Res       Date:  1994-01-11       Impact factor: 16.971

9.  A comprehensive biochemical and genetic analysis of the yeast U1 snRNP reveals five novel proteins.

Authors:  A Gottschalk; J Tang; O Puig; J Salgado; G Neubauer; H V Colot; M Mann; B Séraphin; M Rosbash; R Lührmann; P Fabrizio
Journal:  RNA       Date:  1998-04       Impact factor: 4.942

10.  Expression of a Structural Protein of the Mycovirus FgV-ch9 Negatively Affects the Transcript Level of a Novel Symptom Alleviation Factor and Causes Virus Infection-Like Symptoms in Fusarium graminearum.

Authors:  Jörg Bormann; Cornelia Heinze; Christine Blum; Michael Mentges; Anke Brockmann; Arne Alder; Svenja Kim Landt; Brian Josephson; Daniela Indenbirken; Michael Spohn; Birte Plitzko; Sandra Loesgen; Michael Freitag; Wilhelm Schäfer
Journal:  J Virol       Date:  2018-08-16       Impact factor: 5.103

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