Literature DB >> 372186

Novel mechanism of post-transcriptional modification of tRNA. Insertion of bases of Q precursors into tRNA by a specific tRNA transglycosylase reaction.

N Okada, S Noguchi, H Kasai, N Shindo-Okada, T Ohgi, T Goto, S Nishimura.   

Abstract

The guanine insertion enzyme isolated from Escherichia coli (tRNA transglycosylase) catalyzed the incorporation of bases of Q (queuosine) precursors into E. coli undermodified tRNAAsn and tRNATyr. These bases of Q precursors were inserted in the first position of the anticodon of tRNASn and tRNATyr, replacing guanine originally located in that position. This is a novel type of post-transcriptional modification, inserting a modified base into the polynucleotide chain by cleavage of the N--C glycoside bond without breakage of the phosphodiester bond. One of the bases of Q precursors, 7-(aminomethyl)-7-deazaguanine, was found in the acid-soluble fraction of E. coli cells, supporting the conclusion that formation of Q, 7-(3,4-trans-4,5-cis-dihydroxy-1-cyclopenten-3-ylaminomethyl)-7-deazaguanosine, in tRNA in vivo actually proceeds by the tRNA transglycosylase reaction.

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Year:  1979        PMID: 372186

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  39 in total

Review 1.  Misreading of termination codons in eukaryotes by natural nonsense suppressor tRNAs.

Authors:  H Beier; M Grimm
Journal:  Nucleic Acids Res       Date:  2001-12-01       Impact factor: 16.971

2.  Comparative genomics and evolution of proteins involved in RNA metabolism.

Authors:  Vivek Anantharaman; Eugene V Koonin; L Aravind
Journal:  Nucleic Acids Res       Date:  2002-04-01       Impact factor: 16.971

3.  Structural basis of biological nitrile reduction.

Authors:  Vimbai M Chikwana; Boguslaw Stec; Bobby W K Lee; Valérie de Crécy-Lagard; Dirk Iwata-Reuyl; Manal A Swairjo
Journal:  J Biol Chem       Date:  2012-07-11       Impact factor: 5.157

4.  Site-specific creation of uridine from cytidine in apolipoprotein B mRNA editing.

Authors:  P E Hodges; N Navaratnam; J C Greeve; J Scott
Journal:  Nucleic Acids Res       Date:  1991-03-25       Impact factor: 16.971

Review 5.  Probing the intermediacy of covalent RNA enzyme complexes in RNA modification enzymes.

Authors:  Stephanie M Chervin; Jeffrey D Kittendorf; George A Garcia
Journal:  Methods Enzymol       Date:  2007       Impact factor: 1.600

6.  On the possible role of tRNA base modifications in the evolution of codon usage: queuosine and Drosophila.

Authors:  Ylenia Chiari; Kirstin Dion; James Colborn; Aristeidis Parmakelis; Jeffrey R Powell
Journal:  J Mol Evol       Date:  2010-03-24       Impact factor: 2.395

7.  Crystal structure of tRNA-guanine transglycosylase: RNA modification by base exchange.

Authors:  C Romier; K Reuter; D Suck; R Ficner
Journal:  EMBO J       Date:  1996-06-03       Impact factor: 11.598

8.  Diet-dependent depletion of queuosine in tRNAs in Caenorhabditis elegans does not lead to a developmental block.

Authors:  Rahul Gaur; Glenn R Björk; Simon Tuck; Umesh Varshney
Journal:  J Biosci       Date:  2007-06       Impact factor: 1.826

9.  Retrograde nuclear transport from the cytoplasm is required for tRNATyr maturation in T. brucei.

Authors:  Alan C Kessler; Sneha S Kulkarni; Mellie J Paulines; Mary Anne T Rubio; Patrick A Limbach; Zdeněk Paris; Juan D Alfonzo
Journal:  RNA Biol       Date:  2017-11-03       Impact factor: 4.652

10.  Diversity and classification of cyclic-oligonucleotide-based anti-phage signalling systems.

Authors:  Adi Millman; Sarah Melamed; Gil Amitai; Rotem Sorek
Journal:  Nat Microbiol       Date:  2020-08-24       Impact factor: 17.745

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