Literature DB >> 17762147

Diet-dependent depletion of queuosine in tRNAs in Caenorhabditis elegans does not lead to a developmental block.

Rahul Gaur1, Glenn R Björk, Simon Tuck, Umesh Varshney.   

Abstract

Queuosine (Q), a hypermodified nucleoside,occurs at the wobble position of transfer RNAs (tRNAs)with GUN anticodons. In eubacteria, absence of Q affects messenger RNA (mRNA) translation and reduces the virulence of certain pathogenic strains. In animal cells,changes in the abundance of Q have been shown to correlate with diverse phenomena including stress tolerance, cell proliferation and tumour growth but the function of Q in animals is poorly understood. Animals are thought to obtain Q (or its analogues) as a micronutrient from dietary sources such as gut micro flora. However,the difficulty of maintaining animals under bacteria-free conditions on Q-deficient diets has severely hampered the study of Q metabolism and function in animals. In this study,we show that as in higher animals, tRNAs in the nematode Caenorhabditis elegans are modified by Q and its sugar derivatives. When the worms were fed on Q-deficient Escherichia coli, Q modification was absent from the worm tRNAs suggesting that C.elegans lacks a de novo pathway of Q biosynthesis. The inherent advantages of C.elegans as a model organism, and the simplicity of conferring a Q-deficient phenotype on it make it an ideal system to investigate the function of Q modification in tRNA.

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Year:  2007        PMID: 17762147     DOI: 10.1007/s12038-007-0074-4

Source DB:  PubMed          Journal:  J Biosci        ISSN: 0250-5991            Impact factor:   1.826


  38 in total

1.  Distribution of the modified nucleoside Q and its derivatives in animal and plant transfer RNA's.

Authors:  H Kasai; Y Kuchino; K Nihei; S Nishimura
Journal:  Nucleic Acids Res       Date:  1975-10       Impact factor: 16.971

2.  Analysis of RNA hydrolyzates by liquid chromatography-mass spectrometry.

Authors:  S C Pomerantz; J A McCloskey
Journal:  Methods Enzymol       Date:  1990       Impact factor: 1.600

3.  Enzymatic synthesis of Q nucleoside containing mannose in the anticodon of tRNA: isolation of a novel mannosyltransferase from a cell-free extract of rat liver.

Authors:  N Okada; S Nishimura
Journal:  Nucleic Acids Res       Date:  1977-08       Impact factor: 16.971

4.  The embryonic cell lineage of the nematode Caenorhabditis elegans.

Authors:  J E Sulston; E Schierenberg; J G White; J N Thomson
Journal:  Dev Biol       Date:  1983-11       Impact factor: 3.582

5.  The nucleotide sequence of mannosyl-Q-containing tRNAAsp from Xenopus laevis oocytes.

Authors:  E Haumont; K Nicoghosian; H Grosjean; R J Cedergren
Journal:  Biochimie       Date:  1984 Jul-Aug       Impact factor: 4.079

6.  Novel mechanism of post-transcriptional modification of tRNA. Insertion of bases of Q precursors into tRNA by a specific tRNA transglycosylase reaction.

Authors:  N Okada; S Noguchi; H Kasai; N Shindo-Okada; T Ohgi; T Goto; S Nishimura
Journal:  J Biol Chem       Date:  1979-04-25       Impact factor: 5.157

7.  Identification of four genes necessary for biosynthesis of the modified nucleoside queuosine.

Authors:  John S Reader; David Metzgar; Paul Schimmel; Valérie de Crécy-Lagard
Journal:  J Biol Chem       Date:  2003-12-02       Impact factor: 5.157

8.  Queuine, a modified base incorporated posttranscriptionally into eukaryotic transfer RNA: wide distribution in nature.

Authors:  J R Katze; B Basile; J A McCloskey
Journal:  Science       Date:  1982-04-02       Impact factor: 47.728

9.  Novel salvage of queuine from queuosine and absence of queuine synthesis in Chlorella pyrenoidosa and Chlamydomonas reinhardtii.

Authors:  G M Kirtland; T D Morris; P H Moore; J J O'Brian; C G Edmonds; J A McCloskey; J R Katze
Journal:  J Bacteriol       Date:  1988-12       Impact factor: 3.490

10.  The genetics of Caenorhabditis elegans.

Authors:  S Brenner
Journal:  Genetics       Date:  1974-05       Impact factor: 4.562

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  8 in total

1.  Queuosine deficiency in eukaryotes compromises tyrosine production through increased tetrahydrobiopterin oxidation.

Authors:  Tatsiana Rakovich; Coilin Boland; Ilana Bernstein; Vimbai M Chikwana; Dirk Iwata-Reuyl; Vincent P Kelly
Journal:  J Biol Chem       Date:  2011-04-12       Impact factor: 5.157

2.  Discovery of epoxyqueuosine (oQ) reductase reveals parallels between halorespiration and tRNA modification.

Authors:  Zachary D Miles; Reid M McCarty; Gabriella Molnar; Vahe Bandarian
Journal:  Proc Natl Acad Sci U S A       Date:  2011-04-18       Impact factor: 11.205

3.  Discovery of novel bacterial queuine salvage enzymes and pathways in human pathogens.

Authors:  Yifeng Yuan; Rémi Zallot; Tyler L Grove; Daniel J Payan; Isabelle Martin-Verstraete; Sara Šepić; Seetharamsingh Balamkundu; Ramesh Neelakandan; Vinod K Gadi; Chuan-Fa Liu; Manal A Swairjo; Peter C Dedon; Steven C Almo; John A Gerlt; Valérie de Crécy-Lagard
Journal:  Proc Natl Acad Sci U S A       Date:  2019-09-03       Impact factor: 12.779

Review 4.  The queuine micronutrient: charting a course from microbe to man.

Authors:  Claire Fergus; Dominic Barnes; Mashael A Alqasem; Vincent P Kelly
Journal:  Nutrients       Date:  2015-04-15       Impact factor: 5.717

Review 5.  Lost in Translation: Defects in Transfer RNA Modifications and Neurological Disorders.

Authors:  Andrea Bednářová; Marley Hanna; Isabella Durham; Tara VanCleave; Alexis England; Anathbandhu Chaudhuri; Natraj Krishnan
Journal:  Front Mol Neurosci       Date:  2017-05-09       Impact factor: 5.639

Review 6.  Cross-Talk between Dnmt2-Dependent tRNA Methylation and Queuosine Modification.

Authors:  Ann E Ehrenhofer-Murray
Journal:  Biomolecules       Date:  2017-02-10

7.  Structural and functional insights into human tRNA guanine transgylcosylase.

Authors:  Katharina Sievers; Luisa Welp; Henning Urlaub; Ralf Ficner
Journal:  RNA Biol       Date:  2021-07-31       Impact factor: 4.766

8.  Plant, animal, and fungal micronutrient queuosine is salvaged by members of the DUF2419 protein family.

Authors:  Rémi Zallot; Céline Brochier-Armanet; Kirk W Gaston; Farhad Forouhar; Patrick A Limbach; John F Hunt; Valérie de Crécy-Lagard
Journal:  ACS Chem Biol       Date:  2014-06-17       Impact factor: 5.100

  8 in total

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