Literature DB >> 3712443

Three-dimensional structure of catalase from Penicillium vitale at 2.0 A resolution.

B K Vainshtein, W R Melik-Adamyan, V V Barynin, A A Vagin, A I Grebenko, V V Borisov, K S Bartels, I Fita, M G Rossmann.   

Abstract

The three-dimensional structure analysis of crystalline fungal catalase from Penicillium vitale has been extended to 2.0 A resolution. The crystals belong to space group P3(1)21, with the unit cell parameters of a = b = 144.4 A and c = 133.8 A. The asymmetric unit contains half a tetrameric molecule of 222 symmetry. Each subunit is a single polypeptide chain of approximately 670 amino acid residues and binds one heme group. The amino acid sequence has been tentatively determined by computer graphics model building (using the FRODO system) and comparison with the known sequence of beef liver catalase. The atomic model has been refined by the Hendrickson & Konnert (1981) restrained least-squares program against 68,000 reflections between 5 A and 2 A resolution. The final R-factor is 0.31 after 24 refinement cycles. The secondary and tertiary structure of the catalase has been analyzed.

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Year:  1986        PMID: 3712443     DOI: 10.1016/0022-2836(86)90479-1

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  18 in total

1.  Crystallization and preliminary X-ray analysis of a bifunctional catalase-phenol oxidase from Scytalidium thermophilum.

Authors:  Didem Sutay Kocabas; Arwen R Pearson; Simon E V Phillips; Ufuk Bakir; Zumrut B Ogel; Michael J McPherson; Chi H Trinh
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2009-04-24

2.  Crystallization and preliminary structural analysis of catalase A from Saccharomyces cerevisiae.

Authors:  S Berthet; L M Nykyri; J Bravo; M J Mate; C Berthet-Colominas; P M Alzari; F Koller; I Fita
Journal:  Protein Sci       Date:  1997-02       Impact factor: 6.725

3.  VeA is associated with the response to oxidative stress in the aflatoxin producer Aspergillus flavus.

Authors:  Sachin Baidya; Rocio M Duran; Jessica M Lohmar; Pamela Y Harris-Coward; Jeffrey W Cary; Sung-Yong Hong; Ludmila V Roze; John E Linz; Ana M Calvo
Journal:  Eukaryot Cell       Date:  2014-06-20

4.  Models for the 3(10)-helix/coil, pi-helix/coil, and alpha-helix/3(10)-helix/coil transitions in isolated peptides.

Authors:  C A Rohl; A J Doig
Journal:  Protein Sci       Date:  1996-08       Impact factor: 6.725

5.  Pi-turns in proteins and peptides: Classification, conformation, occurrence, hydration and sequence.

Authors:  K R Rajashankar; S Ramakumar
Journal:  Protein Sci       Date:  1996-05       Impact factor: 6.725

Review 6.  Human catalase: looking for complete identity.

Authors:  Madhur M Goyal; Anjan Basak
Journal:  Protein Cell       Date:  2010-11-09       Impact factor: 14.870

7.  Role of the lateral channel in catalase HPII of Escherichia coli.

Authors:  M S Sevinc; M J Maté; J Switala; I Fita; P C Loewen
Journal:  Protein Sci       Date:  1999-03       Impact factor: 6.725

8.  A peroxide/ascorbate-inducible catalase from Haemophilus influenzae is homologous to the Escherichia coli katE gene product.

Authors:  W R Bishai; H O Smith; G J Barcak
Journal:  J Bacteriol       Date:  1994-05       Impact factor: 3.490

9.  Biochemical and genetic analyses of a catalase from the anaerobic bacterium Bacteroides fragilis.

Authors:  E R Rocha; C J Smith
Journal:  J Bacteriol       Date:  1995-06       Impact factor: 3.490

Review 10.  Evolution of catalases from bacteria to humans.

Authors:  Marcel Zamocky; Paul G Furtmüller; Christian Obinger
Journal:  Antioxid Redox Signal       Date:  2008-09       Impact factor: 8.401

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