Literature DB >> 370777

Nucleotide sequence of gene VII and of a hypothetical gene (IX) in bacteriophage M13.

T Hulsebos, J G Schoenmakers.   

Abstract

A DNA fragment containing gene VII of bacteriophage M13 has been transcribed and the nucleotide sequence of this 169-nucleotides long transcript was determined by RNA sequencing methods. Additionally, the nucleotide sequence of this gene and parts of its neighbouring genes V and VIII has been determined by the dimethylsulphate-hydrazine technique. The reading frame of gene VII has been established by determining the nucleotide changes occurring in the transcripts of two amber mutants of this gene. From these combined data it is apparent that gene VII is only 99 nucleotides long and is immediately followed by the termination codon UGA. Its initiation codon AUG is separated from gene V by only a single nucleotide. It was noted that between the UGA termination codon of gene VII and the initiation codon of the next gene (gene VIII) there is space for another, hitherto unknown gene. This gene (IX) most probably codes for the small polypeptide ("C-protein") present in mature M13 phage particles.

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Year:  1978        PMID: 370777      PMCID: PMC342781          DOI: 10.1093/nar/5.12.4677

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  22 in total

1.  Physical mapping of the central terminator for transcription on the bacteriophage M13 genome.

Authors:  L Edens; R N Konings; J G Schoenmakers
Journal:  Nucleic Acids Res       Date:  1975-10       Impact factor: 16.971

2.  Studies on bacteriophage fd DNA. IV. The sequence of messenger RNA for the major coat protein gene.

Authors:  K Sugimoto; H Sugisaki; T Okamoto; M Takanami
Journal:  J Mol Biol       Date:  1977-04-25       Impact factor: 5.469

3.  A new method for sequencing DNA.

Authors:  A M Maxam; W Gilbert
Journal:  Proc Natl Acad Sci U S A       Date:  1977-02       Impact factor: 11.205

4.  Effects of ribosomal mutations on the read-through of a chain termination signal: studies on the synthesis of bacteriophage lambda O gene protein in vitro.

Authors:  J L Yates; W R Gette; M E Furth; M Nomura
Journal:  Proc Natl Acad Sci U S A       Date:  1977-02       Impact factor: 11.205

5.  Sequence and symmetry in ribosome binding sites of bacteriophage f1 RNA.

Authors:  G Pieczenik; P Model; H D Robertson
Journal:  J Mol Biol       Date:  1974-12-05       Impact factor: 5.469

6.  [Virus proteins. IV. Constitution of the coat protein of the fd phage].

Authors:  F Asbeck; K Beyreuther; H Köhler; G von Wettstein; G Braunitzer
Journal:  Hoppe Seylers Z Physiol Chem       Date:  1969-09

7.  A cascade mechanism of transcription in bacteriophage M13 DNA.

Authors:  L Edens; R N Konings; J G Schoenmakers
Journal:  Virology       Date:  1978-05-15       Impact factor: 3.616

8.  Mapping of promoter sites on the genome of bacteriophage M13.

Authors:  L Edens; P van Wezenbeek; N H Konings; J G Schoenmakers
Journal:  Eur J Biochem       Date:  1976-11-15

9.  Restriction-enzyme-cleavage maps of bacteriophage M13. Existence of an intergenic region on the M13 genome.

Authors:  C A Van Den Hondel; L Pennings; J G Schoenmakers
Journal:  Eur J Biochem       Date:  1976-09

10.  Nucleotide sequence of the rightward operator of phage lambda.

Authors:  T Maniatis; A Jeffrey; D G Kleid
Journal:  Proc Natl Acad Sci U S A       Date:  1975-03       Impact factor: 11.205

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  8 in total

1.  Nucleotide sequence of the genes III, VI and I of bacteriophage M13.

Authors:  P van Wezenbeek; J G Schoenmakers
Journal:  Nucleic Acids Res       Date:  1979-06-25       Impact factor: 16.971

Review 2.  Ff coliphages: structural and functional relationships.

Authors:  I Rasched; E Oberer
Journal:  Microbiol Rev       Date:  1986-12

3.  Codon frequencies in 119 individual genes confirm consistent choices of degenerate bases according to genome type.

Authors:  R Grantham; C Gautier; M Gouy
Journal:  Nucleic Acids Res       Date:  1980-05-10       Impact factor: 16.971

4.  Oligonucleotide-directed mutagenesis of gene IX of bacteriophage M13.

Authors:  G F Simons; G H Veeneman; R N Konings; J H van Boom; J G Schoemakers
Journal:  Nucleic Acids Res       Date:  1982-02-11       Impact factor: 16.971

Review 5.  Compilation and analysis of Escherichia coli promoter DNA sequences.

Authors:  D K Hawley; W R McClure
Journal:  Nucleic Acids Res       Date:  1983-04-25       Impact factor: 16.971

Review 6.  Codon catalog usage and the genome hypothesis.

Authors:  R Grantham; C Gautier; M Gouy; R Mercier; A Pavé
Journal:  Nucleic Acids Res       Date:  1980-01-11       Impact factor: 16.971

7.  UGA suppression by normal tRNA Trp in Escherichia coli: codon context effects.

Authors:  H Engelberg-Kulka
Journal:  Nucleic Acids Res       Date:  1981-02-25       Impact factor: 16.971

8.  Nucleotide sequences in bacteriophage f1 DNA: nucleotide sequence of genes V, VII, and VIII.

Authors:  D F Hill; G B Petersen
Journal:  J Virol       Date:  1980-04       Impact factor: 5.103

  8 in total

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