Literature DB >> 3700390

Studies on the active site of succinyl-CoA:tetrahydrodipicolinate N-succinyltransferase. Characterization using analogs of tetrahydrodipicolinate.

D A Berges, W E DeWolf, G L Dunn, D J Newman, S J Schmidt, J J Taggart, C Gilvarg.   

Abstract

Cyclic and acyclic analogs of tetrahydrodipicolinate (THDPA) are evaluated in a study of the active site of succinyl-CoA:tetrahydrodipicolinate N-succinyltransferase. In addition to the natural substrate, THDPA, one cyclic and several acyclic compounds are also succinylated. 2-Hydroxytetrahydropyran-2,6-dicarboxylic acid is a potent competitive inhibitor having a Kis of 58 nM. Based on the results of this study, a stereochemical model for the succinylation of THDPA is proposed. The major features of this model are as follows. 1) The succinylase binds THDPA (L-configuration). 2) Hydration of the imine group follows to give 2-hydroxypiperidine-2,6-dicarboxylic acid in which the two carboxyl groups are trans. 3) Succinylation then occurs and the ring opens to give the acyclic product. It is suggested that 2-hydroxytetrahydropyran-2,6-dicarboxylic acid is a transition state analog by virtue of the fact that it structurally resembles the hydrated intermediate.

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Year:  1986        PMID: 3700390

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  14 in total

1.  An LL-diaminopimelate aminotransferase defines a novel variant of the lysine biosynthesis pathway in plants.

Authors:  André O Hudson; Bijay K Singh; Thomas Leustek; Charles Gilvarg
Journal:  Plant Physiol       Date:  2005-12-16       Impact factor: 8.340

2.  Cloning, expression, purification, crystallization and preliminary X-ray diffraction analysis of tetrahydrodipicolinate-N-succinyltransferase (Rv1201c) from Mycobacterium tuberculosis.

Authors:  Linda Schuldt; Simone Weyand; Georgia Kefala; Manfred S Weiss
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2008-08-29

3.  Filifactor alocis--a new emerging periodontal pathogen.

Authors:  A Wilson Aruni; Arunima Mishra; Yuetan Dou; Ozioma Chioma; Brittany N Hamilton; Hansel M Fletcher
Journal:  Microbes Infect       Date:  2015-04-02       Impact factor: 2.700

4.  Acyl group specificity at the active site of tetrahydridipicolinate N-succinyltransferase.

Authors:  Todd W Beaman; Kurt W Vogel; Dale G Drueckhammer; John S Blanchard; Steven L Roderick
Journal:  Protein Sci       Date:  2002-04       Impact factor: 6.725

5.  Amino acid biosynthesis in the halophilic archaeon Haloarcula hispanica.

Authors:  M Hochuli; H Patzelt; D Oesterhelt; K Wüthrich; T Szyperski
Journal:  J Bacteriol       Date:  1999-05       Impact factor: 3.490

6.  Proteome variation among Filifactor alocis strains.

Authors:  A Wilson Aruni; Francis Roy; Lawrence Sandberg; Hansel M Fletcher
Journal:  Proteomics       Date:  2012-11       Impact factor: 3.984

7.  A functionally split pathway for lysine synthesis in Corynebacterium glutamicium.

Authors:  B Schrumpf; A Schwarzer; J Kalinowski; A Pühler; L Eggeling; H Sahm
Journal:  J Bacteriol       Date:  1991-07       Impact factor: 3.490

Review 8.  Filifactor alocis: The Newly Discovered Kid on the Block with Special Talents.

Authors:  W Aruni; O Chioma; H M Fletcher
Journal:  J Dent Res       Date:  2014-06-04       Impact factor: 6.116

9.  Biochemical and phylogenetic characterization of a novel diaminopimelate biosynthesis pathway in prokaryotes identifies a diverged form of LL-diaminopimelate aminotransferase.

Authors:  André O Hudson; Charles Gilvarg; Thomas Leustek
Journal:  J Bacteriol       Date:  2008-02-29       Impact factor: 3.490

10.  Mechanistic analysis of ghrelin-O-acyltransferase using substrate analogs.

Authors:  Martin S Taylor; Daniel R Dempsey; Yousang Hwang; Zan Chen; Nam Chu; Jef D Boeke; Philip A Cole
Journal:  Bioorg Chem       Date:  2015-07-13       Impact factor: 5.275

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