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Literature DB >> 3658691

Structural conventions for group I introns.

J M Burke¹, M Belfort, T R Cech, R W Davies, R J Schweyen, D A Shub, J W Szostak, H F Tabak.

Abstract

Conventions for nomenclature of structural elements and a standard secondary structure representation for group I introns have been established by workers in the field. These conventions are designed to facilitate effective communication of information concerning the structure and function of these self-splicing introns.

Mesh：

Substances：
RNA, Ribosomal

Year: 1987 PMID： 3658691 PMCID： PMC306243 DOI： 10.1093/nar/15.18.7217

Source DB: PubMed Journal: Nucleic Acids Res ISSN： 0305-1048 Impact factor: 16.971

11 in total

1. The chemistry of self-splicing RNA and RNA enzymes.

Authors: T R Cech
Journal: Science Date: 1987-06-19 Impact factor: 47.728

2. Role of conserved sequence elements 9L and 2 in self-splicing of the Tetrahymena ribosomal RNA precursor.

Authors: J M Burke; K D Irvine; K J Kaneko; B J Kerker; A B Oettgen; W M Tierney; C L Williamson; A J Zaug; T R Cech
Journal: Cell Date: 1986-04-25 Impact factor: 41.582

3. One binding site determines sequence specificity of Tetrahymena pre-rRNA self-splicing, trans-splicing, and RNA enzyme activity.

Authors: M D Been; T R Cech
Journal: Cell Date: 1986-10-24 Impact factor: 41.582

4. Characterization of the intron in the phage T4 thymidylate synthase gene and evidence for its self-excision from the primary transcript.

Authors: F K Chu; G F Maley; D K West; M Belfort; F Maley
Journal: Cell Date: 1986-04-25 Impact factor: 41.582

5. Assessment of a model for intron RNA secondary structure relevant to RNA self-splicing--a review.

Authors: R B Waring; R W Davies
Journal: Gene Date: 1984-06 Impact factor: 3.688

6. Critical sequences within mitochondrial introns: pleiotropic mRNA maturase and cis-dominant signals of the box intron controlling reductase and oxidase.

Authors: H De La Salle; C Jacq; P P Slonimski
Journal: Cell Date: 1982-04 Impact factor: 41.582

7. Secondary structure of the Tetrahymena ribosomal RNA intervening sequence: structural homology with fungal mitochondrial intervening sequences.

Authors: T R Cech; N K Tanner; I Tinoco; B R Weir; M Zuker; P S Perlman
Journal: Proc Natl Acad Sci U S A Date: 1983-07 Impact factor: 11.205

8. Making ends meet: a model for RNA splicing in fungal mitochondria.

Authors: R W Davies; R B Waring; J A Ray; T A Brown; C Scazzocchio
Journal: Nature Date: 1982-12-23 Impact factor: 49.962

9. The chloroplast ribosomal intron of Chlamydomonas reinhardii codes for a polypeptide related to mitochondrial maturases.

Authors: J D Rochaix; M Rahire; F Michel
Journal: Nucleic Acids Res Date: 1985-02-11 Impact factor: 16.971

10. Comparison of fungal mitochondrial introns reveals extensive homologies in RNA secondary structure.

Authors: F Michel; A Jacquier; B Dujon
Journal: Biochimie Date: 1982-10 Impact factor: 4.079

100 in total

1. Ribonucleotide reductase genes of Bacillus prophages: a refuge to introns and intein coding sequences.

Authors: V Lazarevic
Journal: Nucleic Acids Res Date: 2001-08-01 Impact factor: 16.971

2. DNA sequence analysis of the 24.5 kilobase pair cytochrome oxidase subunit I mitochondrial gene from Podospora anserina: a gene with sixteen introns.

Authors: D J Cummings; F Michel; K L McNally
Journal: Curr Genet Date: 1989-12 Impact factor: 3.886

10. Mitochondrial genes in the colourless alga Prototheca wickerhamii resemble plant genes in their exons but fungal genes in their introns.

Authors: G Wolff; G Burger; B F Lang; U Kück
Journal: Nucleic Acids Res Date: 1993-02-11 Impact factor: 16.971

Structural conventions for group I introns.

1. The chemistry of self-splicing RNA and RNA enzymes.

2. Role of conserved sequence elements 9L and 2 in self-splicing of the Tetrahymena ribosomal RNA precursor.

3. One binding site determines sequence specificity of Tetrahymena pre-rRNA self-splicing, trans-splicing, and RNA enzyme activity.

4. Characterization of the intron in the phage T4 thymidylate synthase gene and evidence for its self-excision from the primary transcript.

5. Assessment of a model for intron RNA secondary structure relevant to RNA self-splicing--a review.

6. Critical sequences within mitochondrial introns: pleiotropic mRNA maturase and cis-dominant signals of the box intron controlling reductase and oxidase.

7. Secondary structure of the Tetrahymena ribosomal RNA intervening sequence: structural homology with fungal mitochondrial intervening sequences.

8. Making ends meet: a model for RNA splicing in fungal mitochondria.

9. The chloroplast ribosomal intron of Chlamydomonas reinhardii codes for a polypeptide related to mitochondrial maturases.

10. Comparison of fungal mitochondrial introns reveals extensive homologies in RNA secondary structure.

1. Ribonucleotide reductase genes of Bacillus prophages: a refuge to introns and intein coding sequences.

2. DNA sequence analysis of the 24.5 kilobase pair cytochrome oxidase subunit I mitochondrial gene from Podospora anserina: a gene with sixteen introns.

3. Mutagenesis of a light-regulated psbA intron reveals the importance of efficient splicing for photosynthetic growth.

4. Mutational evidence for competition between the P1 and the P10 helices of a mitochondrial group I intron.

5. Characterization of the self-splicing products of a mobile intron from the nuclear rDNA of Physarum polycephalum.

6. Crystal structure of a group I intron splicing intermediate.

7. Splicing of COB intron 5 requires pairing between the internal guide sequence and both flanking exons.

8. A nomenclature for all signal recognition particle RNAs.

9. The gene coding for small ribosomal subunit RNA in the basidiomycete Ustilago maydis contains a group I intron.

10. Mitochondrial genes in the colourless alga Prototheca wickerhamii resemble plant genes in their exons but fungal genes in their introns.