Literature DB >> 36229605

Algal photosystem I dimer and high-resolution model of PSI-plastocyanin complex.

Andreas Naschberger1, Laura Mosebach2, Victor Tobiasson1, Sebastian Kuhlgert2, Martin Scholz2, Annemarie Perez-Boerema1, Thi Thu Hoai Ho2,3, André Vidal-Meireles2, Yuichiro Takahashi4,5, Michael Hippler6,7, Alexey Amunts8.   

Abstract

Photosystem I (PSI) enables photo-electron transfer and regulates photosynthesis in the bioenergetic membranes of cyanobacteria and chloroplasts. Being a multi-subunit complex, its macromolecular organization affects the dynamics of photosynthetic membranes. Here we reveal a chloroplast PSI from the green alga Chlamydomonas reinhardtii that is organized as a homodimer, comprising 40 protein subunits with 118 transmembrane helices that provide scaffold for 568 pigments. Cryogenic electron microscopy identified that the absence of PsaH and Lhca2 gives rise to a head-to-head relative orientation of the PSI-light-harvesting complex I monomers in a way that is essentially different from the oligomer formation in cyanobacteria. The light-harvesting protein Lhca9 is the key element for mediating this dimerization. The interface between the monomers is lacking PsaH and thus partially overlaps with the surface area that would bind one of the light-harvesting complex II complexes in state transitions. We also define the most accurate available PSI-light-harvesting complex I model at 2.3 Å resolution, including a flexibly bound electron donor plastocyanin, and assign correct identities and orientations to all the pigments, as well as 621 water molecules that affect energy transfer pathways.
© 2022. The Author(s).

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Year:  2022        PMID: 36229605      PMCID: PMC9579051          DOI: 10.1038/s41477-022-01253-4

Source DB:  PubMed          Journal:  Nat Plants        ISSN: 2055-0278            Impact factor:   17.352


  73 in total

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Authors:  Paul Emsley; Kevin Cowtan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2004-11-26

2.  In-gel digestion for mass spectrometric characterization of proteins and proteomes.

Authors:  Andrej Shevchenko; Henrik Tomas; Jan Havlis; Jesper V Olsen; Matthias Mann
Journal:  Nat Protoc       Date:  2006       Impact factor: 13.491

3.  MolProbity: More and better reference data for improved all-atom structure validation.

Authors:  Christopher J Williams; Jeffrey J Headd; Nigel W Moriarty; Michael G Prisant; Lizbeth L Videau; Lindsay N Deis; Vishal Verma; Daniel A Keedy; Bradley J Hintze; Vincent B Chen; Swati Jain; Steven M Lewis; W Bryan Arendall; Jack Snoeyink; Paul D Adams; Simon C Lovell; Jane S Richardson; David C Richardson
Journal:  Protein Sci       Date:  2017-11-27       Impact factor: 6.725

4.  Structure of a minimal photosystem I from the green alga Dunaliella salina.

Authors:  Annemarie Perez-Boerema; Daniel Klaiman; Ido Caspy; Sigal Y Netzer-El; Alexey Amunts; Nathan Nelson
Journal:  Nat Plants       Date:  2020-03-02       Impact factor: 15.793

5.  Supramolecular assembly of chloroplast NADH dehydrogenase-like complex with photosystem I from Arabidopsis thaliana.

Authors:  Xiaodong Su; Duanfang Cao; Xiaowei Pan; Lifang Shi; Zhenfeng Liu; Luca Dall'Osto; Roberto Bassi; Xinzheng Zhang; Mei Li
Journal:  Mol Plant       Date:  2022-02-02       Impact factor: 13.164

6.  Cryo-EM structure of the dimeric Rhodobacter sphaeroides RC-LH1 core complex at 2.9 Å: the structural basis for dimerisation.

Authors:  Pu Qian; Tristan I Croll; Andrew Hitchcock; Philip J Jackson; Jack H Salisbury; Pablo Castro-Hartmann; Kasim Sader; David J K Swainsbury; C Neil Hunter
Journal:  Biochem J       Date:  2021-11-12       Impact factor: 3.857

7.  Protocol for micro-purification, enrichment, pre-fractionation and storage of peptides for proteomics using StageTips.

Authors:  Juri Rappsilber; Matthias Mann; Yasushi Ishihama
Journal:  Nat Protoc       Date:  2007       Impact factor: 13.491

8.  Chloroplast transformation in Chlamydomonas with high velocity microprojectiles.

Authors:  J E Boynton; N W Gillham; E H Harris; J P Hosler; A M Johnson; A R Jones; B L Randolph-Anderson; D Robertson; T M Klein; K B Shark
Journal:  Science       Date:  1988-06-10       Impact factor: 47.728

9.  Amyloid structure determination in RELION-3.1.

Authors:  Sjors H W Scheres
Journal:  Acta Crystallogr D Struct Biol       Date:  2020-01-30       Impact factor: 7.652

10.  Structure of a cyanobacterial photosystem I tetramer revealed by cryo-electron microscopy.

Authors:  Koji Kato; Ryo Nagao; Tian-Yi Jiang; Yoshifumi Ueno; Makio Yokono; Siu Kit Chan; Mai Watanabe; Masahiko Ikeuchi; Jian-Ren Shen; Seiji Akimoto; Naoyuki Miyazaki; Fusamichi Akita
Journal:  Nat Commun       Date:  2019-10-30       Impact factor: 14.919

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