| Literature DB >> 36213129 |
Ernesto Cuevasanta1,2,3, Dayana Benchoam1,3,4, Jonathan A Semelak5, Matías N Möller3,6, Ari Zeida3,7, Madia Trujillo3,7, Beatriz Alvarez1,3, Darío A Estrin5.
Abstract
Persulfides (RSSH/RSS-) are species closely related to thiols (RSH/RS-) and hydrogen sulfide (H2S/HS-), and can be formed in biological systems in both low and high molecular weight cysteine-containing compounds. They are key intermediates in catabolic and biosynthetic processes, and have been proposed to participate in the transduction of hydrogen sulfide effects. Persulfides are acidic, more acidic than thiols, and the persulfide anions are expected to be the predominant species at neutral pH. The persulfide anion has high nucleophilicity, due in part to the alpha effect, i.e., the increased reactivity of a nucleophile when the neighboring atom has high electron density. In addition, persulfides have electrophilic character, a property that is absent in both thiols and hydrogen sulfide. In this article, the biochemistry of persulfides is described, and the possible ways in which the formation of a persulfide could impact on the properties of the biomolecule involved are discussed.Entities:
Keywords: alpha effect; cysteine; hydrogen sulfide; persulfide; sulfhydryl
Year: 2022 PMID: 36213129 PMCID: PMC9538486 DOI: 10.3389/fmolb.2022.975988
Source DB: PubMed Journal: Front Mol Biosci ISSN: 2296-889X
FIGURE 1Acid-base equilibrium and reactivity of biological hydropersulfides. Protonated (RSSH) and ionized persulfides (RSS−) are in equilibrium, affecting their reactivity. The electrophilic behavior of protonated persulfides (yellow background) is exemplified by a protein persulfide and a thiolate (RS−) as nucleophile. The nucleophilic behavior of persulfides (light blue background) is illustrated by a protein persulfide and a generic disulfide (RSSR′) as electrophile.
FIGURE 2Functional and structural consequences of the persulfidation of the reactive cysteine in MtAhpE. (A) Time courses comparison of the reactions of native (thiol, black) and persulfidated (red) enzymes with H2O2 (one of its physiological substrates, top) or 4,4′-dithiodipyridine (DTDPy, synthetic unspecific substrate, bottom) as electrophiles. (B) Superposition of representative structures of native (cyan, sticks) and persulfidated (gray, balls and sticks) MtAhpE active sites. Dotted lines indicate the distances of the key interactions among the peroxidatic cysteine and threonine or arginine residues that form the catalytic triad (black, native; red, persulfidated). Modified from (Cuevasanta et al., 2019).
FIGURE 3Detection of persulfides based on their reactivity. (A) The nucleophilicity of persulfides is exploited by means of the reaction with electrophilic alkylating agents such as iodoacetamide (IAM), monobromobimane (mBrB), N-ethylmaleimide and functionalized derivatives of maleimide and iodoacetamide (Mal-X1 and IA-X2) to generate a mixed disulfide. On the other hand, thiols generate a thioether. A subsequent reduction with DTT or TCEP generates the thiol from the mixed disulfide. This strategy has been used to study the formation of persulfides in LMW thiols and proteins, combined with mass spectrometry detection, in-gel detection or proteomics approaches. (B) The electrophilicity of persulfides is used when detecting persulfides by DTT reduction and H2S quantification, in the cold cyanolysis method detecting the ultimate formation of ferric thiocyanate, and with the fluorogenic probe SSP2. (C) A mixed approach has also been devised that first uses electrophilic reagents such as MSBT-A or NBD-Cl that generate an activated disulfide. In a second step, a nucleophile, either a functionalized cyanoacetate derivative or dimedone derivative, specifically reacts with this activated disulfide that then labels the site covalently. These methods have been named Tag-switch and dimedone-switch, respectively, and have been used in combination with in-gel detection, fluorescence microscopy and proteomics approaches. Further information is provided in the text and in (Cuevasanta et al., 2022).