| Literature DB >> 36212040 |
Qiao Liao1,2, Jian He3, Kun Huang1,2.
Abstract
Objectives: Physical activity (PA) is considered beneficial in slowing the progression and improving the neurodegenerative disease prognosis. However, the association between PA and neurodegenerative diseases remains unknown. In this study, we conducted a two-sample Mendelian randomization (MR) analysis to estimate the causal association between PA phenotypes and neurodegenerative diseases. Materials and methods: Genetic variants robustly associated with PA phenotypes, used as instrumental variables, were extracted from public genome-wide association study (GWAS) summary statistics. Neurodegenerative diseases, including amyotrophic lateral sclerosis (ALS), Parkinson's disease (PD), and Alzheimer's disease (AD), were considered outcomes. GWAS information was also obtained from the most recent large population study of individuals with European ancestry. Multiple MR methods, pleiotropy tests and sensitivity analyses were performed to obtain a robust and valid estimation.Entities:
Keywords: Alzheimer’s disease; Mendelian randomization; Parkinson’s disease; amyotrophic lateral sclerosis; neurodegenerative diseases; physical activity
Year: 2022 PMID: 36212040 PMCID: PMC9541335 DOI: 10.3389/fnagi.2022.991140
Source DB: PubMed Journal: Front Aging Neurosci ISSN: 1663-4365 Impact factor: 5.702
FIGURE 1Assumptions and design of the two-sample mendelian randomization in this study. Genetic variants significantly associated with physical activity phenotypes are used as instrumental variables. MVPA, Self-reported moderate-to-vigorous physical activity; VPA, Self-reported vigorous physical activity; OAA, Overall acceleration average; FAA, Fraction of accelerations > 425 milli-gravities; IVW, Inverse variance weighted; ALS, amyotrophic lateral sclerosis; PD, Parkinson’s disease; AD, Alzheimer’s disease.
FIGURE 2Scatter plot of causal effect of MVPA (A) and VPA (B) on ALS. MVPA, Self-reported moderate-to-vigorous physical activity; VPA, Self-reported vigorous physical activity; SNP, single nucleotide polymorphism; ALS, amyotrophic lateral sclerosis.
FIGURE 3Forest plot of causal effect of physical activity phenotypes on amyotrophic lateral sclerosis (A), Parkinson’s disease (B), and Alzheimer’s disease (C) estimated by the inverse variance weighted method. PA, physical activity; SNP, single nucleotide polymorphism; MVPA, Self-reported moderate-to-vigorous physical activity; VPA, Self-reported vigorous physical activity; OAA, Overall acceleration average; FAA, Fraction of accelerations > 425 milli-gravities; OR, odds ratio; CI, confidence interval.
Estimated association between physical activity phenotypes and amyotrophic lateral sclerosis.
| PA phenotypes | MR methods | Number of SNPs |
| OR (95% CI) |
| MVPA | IVW | 7 | 0.013 | 2.507 (1.218–5.160) |
| MR Egger | 7 | 0.421 | 3.433 (0.218–54.024) | |
| Maximum likelihood | 7 | 0.013 | 2.545 (1.220–5.309) | |
| Simple median | 7 | 0.278 | 1.772 (0.631–4.974) | |
| Weighted median | 7 | 0.197 | 1.939 (0.709–5.300) | |
| VPA | IVW | 5 | 0.168 | 2.566 (0.671–9.810) |
| MR Egger | 5 | 0.840 | 3.318 (0–145568.627) | |
| Maximum likelihood | 5 | 0.168 | 2.575 (0.670–9.896) | |
| Simple median | 5 | 0.310 | 2.432 (0.437–13.528) | |
| Weighted median | 5 | 0.339 | 2.277 (0.421–12.317) | |
| OAA | IVW | 8 | 0.058 | 0.953 (0.906–1.002) |
| MR Egger | 8 | 0.656 | 1.057 (0.839–1.331) | |
| Maximum likelihood | 8 | 0.036 | 0.951 (0.907–0.997) | |
| Simple median | 8 | 0.068 | 0.947 (0.894–1.004) | |
| Weighted median | 8 | 0.069 | 0.944 (0.887–1.004) | |
| FAA | IVW | 8 | 0.381 | 0.815 (0.515–1.288) |
| MR Egger | 8 | 0.257 | 0.013 (0.000–11.571) | |
| Maximum likelihood | 8 | 0.336 | 0.809 (0.526–1.245) | |
| Simple median | 8 | 0.868 | 1.050 (0.590–1.867) | |
| Weighted median | 8 | 0.830 | 1.066 (0.598–1.900) |
*p-value less than 0.05 is considered statistically significant.
PA, physical activity; MR, mendelian randomization; SNP, single nucleotide polymorphism; MVPA, Self-reported moderate-to-vigorous physical activity; VPA, Self-reported vigorous physical activity; OAA, Overall acceleration average; FAA, Fraction of accelerations > 425 milli-gravities; IVW, Inverse variance weighted; OR, odds ratio; CI, confidence interval.
Sensitivity test of the mendelian randomization analysis between physical activity phenotypes and amyotrophic lateral sclerosis.
| PA phenotypes | MR methods | Heterogeneity test | Horizontal pleiotropy | MR-PRESSO | Steiger test | ||
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| Cochran’s Q |
| Egger_intercept |
|
| |||
| MVPA | −0.005 | 0.826 | 0.514 | <0.001 | |||
| IVW | 5.327 | 0.503 | |||||
| MR-Egger | 5.270 | 0.384 | |||||
| VPA | −0.003 | 0.965 | 0.813 | 0 | |||
| IVW | 1.647 | 0.800 | |||||
| MR-Egger | 1.645 | 0.649 | |||||
| OAA | −0.028 | 0.400 | 0.312 | 0 | |||
| IVW | 8.436 | 0.296 | |||||
| MR-Egger | 7.423 | 0.283 | |||||
| FAA | 0.103 | 0.277 | 0.354 | 0 | |||
| IVW | 8.188 | 0.316 | |||||
| MR-Egger | 6.613 | 0.358 | |||||
*p-value less than 0.05 is considered statistically significant.
PA, physical activity; MR, mendelian randomization; MVPA, Self-reported moderate-to-vigorous physical activity; VPA, Self-reported vigorous physical activity; OAA, Overall acceleration average; FAA, Fraction of accelerations > 425 milli-gravities; IVW, Inverse variance weighted.