Literature DB >> 36205737

Functional Guilds, Community Assembly, and Co-occurrence Patterns of Fungi in Metalliferous Mine Tailings Ponds in Mainland China.

Shi-Wei Feng1, Jing-Li Lu1, Jie-Liang Liang1, Zhuo-Hui Wu1, Xinzhu Yi1, Ping Wen1, Feng-Lin Li1, Bin Liao2, Pu Jia3, Wen-Sheng Shu1, Jin-Tian Li1.   

Abstract

Metalliferous mine tailings ponds are generally characterized by low levels of nutrient elements, sustained acidic conditions, and high contents of toxic metals. They represent one kind of extreme environments that are believed to resemble the Earth's early environmental conditions. There is increasing evidence that the diversity of fungi inhabiting mine tailings ponds is much higher than previously thought. However, little is known about functional guilds, community assembly, and co-occurrence patterns of fungi in such habitats. As a first attempt to address this critical knowledge gap, we employed high-throughput sequencing to characterize fungal communities in 33 mine tailings ponds distributed across 18 provinces of mainland China. A total of 5842 fungal phylotypes were identified, with saprotrophic fungi being the major functional guild. The predictors of fungal diversity in whole community and sub-communities differed considerably. Community assembly of the whole fungal community and individual functional guilds were primarily governed by stochastic processes. Total soil nitrogen and total phosphorus mediated the balance between stochastic and deterministic processes of the fungal community assembly. Co-occurrence network analysis uncovered a high modularity of the whole fungal community. The observed main modules largely consisted of saprotrophic fungi as well as various phylotypes that could not be assigned to known functional guilds. The richness of core fungal phylotypes, occupying vital positions in co-occurrence network, was positively correlated with edaphic properties such as soil enzyme activity. This indicates the important roles of core fungal phylotypes in soil organic matter decomposition and nutrient cycling. These findings improve our understanding of fungal ecology of extreme environments.
© 2022. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  Co-occurrence Network; Community Assembly; Environmental Adaptation; Functional Guild; Mine Tailings Ponds; Stochastic Process

Year:  2022        PMID: 36205737     DOI: 10.1007/s00248-022-02121-6

Source DB:  PubMed          Journal:  Microb Ecol        ISSN: 0095-3628            Impact factor:   4.192


  58 in total

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Authors:  H W Paerl; J L Pinckney; T F Steppe
Journal:  Environ Microbiol       Date:  2000-02       Impact factor: 5.491

2.  Bacterial communities associated with a mineral weathering profile at a sulphidic mine tailings dump in arid Western Australia.

Authors:  Steven A Wakelin; Ravi R Anand; Frank Reith; Adrienne L Gregg; Ryan R P Noble; Kate C Goldfarb; Gary L Andersen; Todd Z DeSantis; Yvette M Piceno; Eoin L Brodie
Journal:  FEMS Microbiol Ecol       Date:  2011-10-24       Impact factor: 4.194

Review 3.  Beyond the Venn diagram: the hunt for a core microbiome.

Authors:  Ashley Shade; Jo Handelsman
Journal:  Environ Microbiol       Date:  2011-10-18       Impact factor: 5.491

4.  Convergent losses of decay mechanisms and rapid turnover of symbiosis genes in mycorrhizal mutualists.

Authors:  Annegret Kohler; Alan Kuo; Laszlo G Nagy; Emmanuelle Morin; Kerrie W Barry; Francois Buscot; Björn Canbäck; Cindy Choi; Nicolas Cichocki; Alicia Clum; Jan Colpaert; Alex Copeland; Mauricio D Costa; Jeanne Doré; Dimitrios Floudas; Gilles Gay; Mariangela Girlanda; Bernard Henrissat; Sylvie Herrmann; Jaqueline Hess; Nils Högberg; Tomas Johansson; Hassine-Radhouane Khouja; Kurt LaButti; Urs Lahrmann; Anthony Levasseur; Erika A Lindquist; Anna Lipzen; Roland Marmeisse; Elena Martino; Claude Murat; Chew Y Ngan; Uwe Nehls; Jonathan M Plett; Anne Pringle; Robin A Ohm; Silvia Perotto; Martina Peter; Robert Riley; Francois Rineau; Joske Ruytinx; Asaf Salamov; Firoz Shah; Hui Sun; Mika Tarkka; Andrew Tritt; Claire Veneault-Fourrey; Alga Zuccaro; Anders Tunlid; Igor V Grigoriev; David S Hibbett; Francis Martin
Journal:  Nat Genet       Date:  2015-02-23       Impact factor: 38.330

5.  Critical biogeochemical functions in the subsurface are associated with bacteria from new phyla and little studied lineages.

Authors:  Laura A Hug; Brian C Thomas; Itai Sharon; Christopher T Brown; Ritin Sharma; Robert L Hettich; Michael J Wilkins; Kenneth H Williams; Andrea Singh; Jillian F Banfield
Journal:  Environ Microbiol       Date:  2015-07-22       Impact factor: 5.491

6.  Core microbiota drive functional stability of soil microbiome in reforestation ecosystems.

Authors:  Shuo Jiao; Weimin Chen; Gehong Wei
Journal:  Glob Chang Biol       Date:  2021-12-11       Impact factor: 10.863

Review 7.  Microbial diversity in extreme environments.

Authors:  Wen-Sheng Shu; Li-Nan Huang
Journal:  Nat Rev Microbiol       Date:  2021-11-09       Impact factor: 60.633

8.  Untangling the fungal niche: the trait-based approach.

Authors:  Thomas W Crowther; Daniel S Maynard; Terence R Crowther; Jordan Peccia; Jeffrey R Smith; Mark A Bradford
Journal:  Front Microbiol       Date:  2014-10-31       Impact factor: 5.640

9.  A few Ascomycota taxa dominate soil fungal communities worldwide.

Authors:  Eleonora Egidi; Manuel Delgado-Baquerizo; Jonathan M Plett; Juntao Wang; David J Eldridge; Richard D Bardgett; Fernando T Maestre; Brajesh K Singh
Journal:  Nat Commun       Date:  2019-05-30       Impact factor: 14.919

Review 10.  Revisiting the 'direct mineral cycling' hypothesis: arbuscular mycorrhizal fungi colonize leaf litter, but why?

Authors:  Rebecca A Bunn; Dylan T Simpson; Lorinda S Bullington; Ylva Lekberg; David P Janos
Journal:  ISME J       Date:  2019-03-25       Impact factor: 10.302

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