Literature DB >> 36197600

Identification of amino acid residues in a proton release pathway near the bacteriochlorophyll dimer in reaction centers from Rhodobacter sphaeroides.

J P Allen1, K D Chamberlain2, J C Williams2.   

Abstract

Insight into control of proton transfer, a crucial attribute of cellular functions, can be gained from investigations of bacterial reaction centers. While the uptake of protons associated with the reduction of the quinone is well characterized, the release of protons associated with the oxidized bacteriochlorophyll dimer has been poorly understood. Optical spectroscopy and proton release/uptake measurements were used to examine the proton release characteristics of twelve mutant reaction centers, each containing a change in an amino acid residue near the bacteriochlorophyll dimer. The mutant reaction centers had optical spectra similar to wild-type and were capable of transferring electrons to the quinones after light excitation of the bacteriochlorophyll dimer. They exhibited a large range in the extent of proton release and in the slow recovery of the optical signal for the oxidized dimer upon continuous illumination. Key roles were indicated for six amino acid residues, Thr L130, Asp L155, Ser L244, Arg M164, Ser M190, and His M193. Analysis of the results points to a hydrogen-bond network that contains these residues, with several additional residues and bound water molecules, forming a proton transfer pathway. In addition to proton transfer, the properties of the pathway are proposed to be responsible for the very slow charge recombination kinetics observed after continuous illumination. The characteristics of this pathway are compared to proton transfer pathways near the secondary quinone as well as those found in photosystem II and cytochrome c oxidase.
© 2022. The Author(s), under exclusive licence to Springer Nature B.V.

Entities:  

Keywords:  Optical spectroscopy; Photosynthesis; Proton transfer; Proton-coupled electron transfer; Purple bacteria

Year:  2022        PMID: 36197600     DOI: 10.1007/s11120-022-00968-x

Source DB:  PubMed          Journal:  Photosynth Res        ISSN: 0166-8595            Impact factor:   3.429


  46 in total

Review 1.  Protonation reactions and their coupling in bacteriorhodopsin.

Authors:  S P Balashov
Journal:  Biochim Biophys Acta       Date:  2000-08-30

Review 2.  The evolutionary pathway from anoxygenic to oxygenic photosynthesis examined by comparison of the properties of photosystem II and bacterial reaction centers.

Authors:  J P Allen; J C Williams
Journal:  Photosynth Res       Date:  2010-05-07       Impact factor: 3.573

3.  Light-induced conformational changes in photosynthetic reaction centers: dielectric relaxation in the vicinity of the dimer.

Authors:  Sasmit S Deshmukh; JoAnn C Williams; James P Allen; László Kálmán
Journal:  Biochemistry       Date:  2010-12-27       Impact factor: 3.162

4.  Characterization of a semi-stable, charge-separated state in reaction centers from Rhodobacter sphaeroides.

Authors:  Ulf Andréasson; Lars-Erik Andréasson
Journal:  Photosynth Res       Date:  2003       Impact factor: 3.573

Review 5.  The structure and function of the cytochrome c2: reaction center electron transfer complex from Rhodobacter sphaeroides.

Authors:  Herbert L Axelrod; Melvin Y Okamura
Journal:  Photosynth Res       Date:  2005       Impact factor: 3.573

6.  Reconstruction of a kinetic model of the chromatophore vesicles from Rhodobacter sphaeroides.

Authors:  Tihamér Geyer; Volkhard Helms
Journal:  Biophys J       Date:  2006-05-19       Impact factor: 4.033

7.  Light-induced conformational changes in photosynthetic reaction centers: redox-regulated proton pathway near the dimer.

Authors:  Sasmit S Deshmukh; JoAnn C Williams; James P Allen; László Kálmán
Journal:  Biochemistry       Date:  2011-03-31       Impact factor: 3.162

Review 8.  Molecular mechanisms for generating transmembrane proton gradients.

Authors:  M R Gunner; Muhamed Amin; Xuyu Zhu; Jianxun Lu
Journal:  Biochim Biophys Acta       Date:  2013-03-16

Review 9.  Continuum Electrostatics Approaches to Calculating pKas and Ems in Proteins.

Authors:  M R Gunner; N A Baker
Journal:  Methods Enzymol       Date:  2016-06-20       Impact factor: 1.600

10.  Insights into Proton-Transfer Pathways during Water Oxidation in Photosystem II.

Authors:  Ipsita Ghosh; Sahr Khan; Gourab Banerjee; Alisha Dziarski; David J Vinyard; Richard J Debus; Gary W Brudvig
Journal:  J Phys Chem B       Date:  2019-09-20       Impact factor: 2.991

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