Literature DB >> 15977062

The structure and function of the cytochrome c2: reaction center electron transfer complex from Rhodobacter sphaeroides.

Herbert L Axelrod1, Melvin Y Okamura.   

Abstract

In the photosynthetic bacterium, Rhodobacter sphaeroides, the mobile electron carrier, cytochrome c2 (cyt c2) transfers an electron from reduced heme to the photooxidized bacteriochlorophyll dimer in the membrane bound reaction center (RC) as part of the light induced cyclic electron transfer chain. A complex between these two proteins that is active in electron transfer has been crystallized and its structure determined by X-ray diffraction. The structure of the cyt:RC complex shows the cyt c2 (cyt c2) positioned at the center of the periplasmic surface of the RC. The exposed heme edge from cyt c2 is in close tunneling contact with the electron acceptor through an intervening bridging residue, Tyr L162 located on the RC surface directly above the bacteriochlorophyll dimer. The binding interface between the two proteins can be divided into two regions: a short-range interaction domain and a long-range interaction domain. The short-range domain includes residues immediately surrounding the tunneling contact region around the heme and Tyr L162 that display close intermolecular contacts optimized for electron transfer. These include a small number of hydrophobic interactions, hydrogen bonds and a pi-cation interaction. The long-range interaction domain consists of solvated complementary charged residues; positively charged residues from the cyt and negatively charged residues from the RC that provide long range electrostatic interactions that can steer the two proteins into position for rapid association.

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Year:  2005        PMID: 15977062     DOI: 10.1007/s11120-005-1368-8

Source DB:  PubMed          Journal:  Photosynth Res        ISSN: 0166-8595            Impact factor:   3.573


  57 in total

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3.  Crystallization and X-ray structure determination of cytochrome c2 from Rhodobacter sphaeroides in three crystal forms.

Authors:  H L Axelrod; G Feher; J P Allen; A J Chirino; M W Day; B T Hsu; D C Rees
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1994-07-01

4.  The architecture of the binding site in redox protein complexes: implications for fast dissociation.

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5.  Transition state and encounter complex for fast association of cytochrome c2 with bacterial reaction center.

Authors:  Osamu Miyashita; José N Onuchic; Melvin Y Okamura
Journal:  Proc Natl Acad Sci U S A       Date:  2004-11-01       Impact factor: 11.205

6.  Protein electron transfer rates set by the bridging secondary and tertiary structure.

Authors:  D N Beratan; J N Betts; J N Onuchic
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Authors:  F Drepper; P Dorlet; P Mathis
Journal:  Biochemistry       Date:  1997-02-11       Impact factor: 3.162

8.  Structure of an electron transfer complex: methylamine dehydrogenase, amicyanin, and cytochrome c551i.

Authors:  L Chen; R C Durley; F S Mathews; V L Davidson
Journal:  Science       Date:  1994-04-01       Impact factor: 47.728

9.  X-ray structure determination of the cytochrome c2: reaction center electron transfer complex from Rhodobacter sphaeroides.

Authors:  Herbert L Axelrod; Edward C Abresch; Melvin Y Okamura; Andrew P Yeh; Douglas C Rees; George Feher
Journal:  J Mol Biol       Date:  2002-05-31       Impact factor: 5.469

10.  Electron transfer from the tetraheme cytochrome to the special pair in isolated reaction centers of Rhodopseudomonas viridis.

Authors:  J M Ortega; P Mathis
Journal:  Biochemistry       Date:  1993-02-02       Impact factor: 3.162

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  14 in total

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Review 2.  Structures of proteins and cofactors: X-ray crystallography.

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Review 3.  The three-dimensional structures of bacterial reaction centers.

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Review 4.  Guidelines for tunneling in enzymes.

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5.  Unfolding pathway and intermolecular interactions of the cytochrome subunit in the bacterial photosynthetic reaction center.

Authors:  Leanne C Miller; Longsheng Zhao; Daniel P Canniffe; David Martin; Lu-Ning Liu
Journal:  Biochim Biophys Acta Bioenerg       Date:  2020-04-17       Impact factor: 3.991

6.  Product-controlled steady-state kinetics between cytochrome aa(3) from Rhodobacter sphaeroides and equine ferrocytochrome c analyzed by a novel spectrophotometric approach.

Authors:  Myat T Lin; Robert B Gennis
Journal:  Biochim Biophys Acta       Date:  2012-04-06

7.  Identification of amino acid residues in a proton release pathway near the bacteriochlorophyll dimer in reaction centers from Rhodobacter sphaeroides.

Authors:  J P Allen; K D Chamberlain; J C Williams
Journal:  Photosynth Res       Date:  2022-10-05       Impact factor: 3.429

8.  Membrane development in purple photosynthetic bacteria in response to alterations in light intensity and oxygen tension.

Authors:  Robert A Niederman
Journal:  Photosynth Res       Date:  2013-05-25       Impact factor: 3.573

9.  Structural and spectropotentiometric analysis of Blastochloris viridis heterodimer mutant reaction center.

Authors:  Nina S Ponomarenko; Liang Li; Antony R Marino; Valentina Tereshko; Agnes Ostafin; Julia A Popova; Edward J Bylina; Rustem F Ismagilov; James R Norris
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10.  Demonstration of short-lived complexes of cytochrome c with cytochrome bc1 by EPR spectroscopy: implications for the mechanism of interprotein electron transfer.

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Journal:  J Biol Chem       Date:  2008-07-10       Impact factor: 5.157

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