Kodye L Abbott1,2,3, Julia M Salamat1,2, Patrick C Flannery1,2,3, Chloe S Chaudhury1,2, Aneesh Chandran4, Saraswathi Vishveshwara5, Sridhar Mani6, Jianfeng Huang3, Amit K Tiwari7,8,9, Satyanarayana R Pondugula1,2. 1. Department of Anatomy, Physiology and Pharmacology, Auburn University, Auburn, Alabama 36849, United States. 2. Auburn University Research Initiative in Cancer, Auburn University, Auburn, Alabama 36849, United States. 3. Salk Institute for Biological Studies, La Jolla, California 92037, United States. 4. Department of Biotechnology and Microbiology, Kannur University, Kannur, Kerala 670661, India. 5. Molecular Biophysics Unit, Indian Institute of Science, Bangalore 560012, India. 6. Albert Einstein Cancer Center, Albert Einstein College of Medicine, New York 10461, United States. 7. Center of Medical Bio-Allied Health Sciences Research, Ajman University, Ajman 306, United Arab Emirates. 8. Department of Pharmacology and Experimental Therapeutics, University of Toledo, Toledo, Ohio 43606, United States. 9. Department of Cell and Cancer Biology, University of Toledo, Toledo, Ohio 43614, United States.
Abstract
During multidrug combination chemotherapy, activation of the nuclear receptor and the transcription factor human pregnane xenobiotic receptor (hPXR) has been shown to play a role in the development of chemoresistance. Mechanistically, this could occur due to the cancer drug activation of hPXR and the subsequent upregulation of hPXR target genes such as the drug metabolism enzyme, cytochrome P450 3A4 (CYP3A4). In the context of hPXR-mediated drug resistance, hPXR antagonists would be useful adjuncts to PXR-activating chemotherapy. However, there are currently no clinically approved hPXR antagonists in the market. Gefitinib (GEF), a tyrosine kinase inhibitor used for the treatment of advanced non-small-cell lung cancer and effectively used in combinational chemotherapy treatments, is a promising candidate owing to its hPXR ligand-like features. We, therefore, investigated whether GEF would act as an hPXR antagonist when combined with a known hPXR agonist, rifampicin (RIF). At therapeutically relevant concentrations, GEF successfully inhibited the RIF-induced upregulation of endogenous CYP3A4 gene expression in human primary hepatocytes and human hepatocells. Additionally, GEF inhibited the RIF induction of hPXR-mediated CYP3A4 promoter activity in HepG2 human liver carcinoma cells. The computational modeling of molecular docking predicted that GEF could bind to multiple sites on hPXR including the ligand-binding pocket, allowing for potential as a direct antagonist as well as an allosteric inhibitor. Indeed, GEF bound to the ligand-binding domain of the hPXR in cell-free assays, suggesting that GEF directly interacts with the hPXR. Taken together, our results suggest that GEF, at its clinically relevant therapeutic concentration, can antagonize the hPXR agonist-induced CYP3A4 gene expression in human hepatocytes. Thus, GEF could be a potential candidate for use in combinational chemotherapies to combat hPXR agonist-induced chemoresistance. Further studies are warranted to determine whether GEF has sufficient hPXR inhibitor abilities to overcome the hPXR agonist-induced chemoresistance.
During multidrug combination chemotherapy, activation of the nuclear receptor and the transcription factor human pregnane xenobiotic receptor (hPXR) has been shown to play a role in the development of chemoresistance. Mechanistically, this could occur due to the cancer drug activation of hPXR and the subsequent upregulation of hPXR target genes such as the drug metabolism enzyme, cytochrome P450 3A4 (CYP3A4). In the context of hPXR-mediated drug resistance, hPXR antagonists would be useful adjuncts to PXR-activating chemotherapy. However, there are currently no clinically approved hPXR antagonists in the market. Gefitinib (GEF), a tyrosine kinase inhibitor used for the treatment of advanced non-small-cell lung cancer and effectively used in combinational chemotherapy treatments, is a promising candidate owing to its hPXR ligand-like features. We, therefore, investigated whether GEF would act as an hPXR antagonist when combined with a known hPXR agonist, rifampicin (RIF). At therapeutically relevant concentrations, GEF successfully inhibited the RIF-induced upregulation of endogenous CYP3A4 gene expression in human primary hepatocytes and human hepatocells. Additionally, GEF inhibited the RIF induction of hPXR-mediated CYP3A4 promoter activity in HepG2 human liver carcinoma cells. The computational modeling of molecular docking predicted that GEF could bind to multiple sites on hPXR including the ligand-binding pocket, allowing for potential as a direct antagonist as well as an allosteric inhibitor. Indeed, GEF bound to the ligand-binding domain of the hPXR in cell-free assays, suggesting that GEF directly interacts with the hPXR. Taken together, our results suggest that GEF, at its clinically relevant therapeutic concentration, can antagonize the hPXR agonist-induced CYP3A4 gene expression in human hepatocytes. Thus, GEF could be a potential candidate for use in combinational chemotherapies to combat hPXR agonist-induced chemoresistance. Further studies are warranted to determine whether GEF has sufficient hPXR inhibitor abilities to overcome the hPXR agonist-induced chemoresistance.
The human pregnane X receptor (hPXR) is
the master xenosensor responsible
for xenobiotic detection, metabolism, and elimination. In response
to xenobiotic binding and activation, hPXR acts as a transcription
factor to upregulate the expression of drug-metabolizing enzymes,
such as CYP3A4.[1−3] CYP3A4 contributes to the metabolism of over 50%
of clinically active drugs. Therefore, the overexpression of this
enzyme can lead to a loss of drug efficacy.[4,5] This
is a major concern for cancer patients as chemoresistance can occur
when chemotherapeutics act as agonists of hPXR, leading to CYP3A4
overexpression and altered metabolism of chemotherapy drugs. Indeed,
combination therapies containing agonists of hPXR can drive increased
metabolism of chemotherapy drugs such as cobimetinib,[6] cabozantinib,[7] imatinib,[8] irinoecan,[9] and vemurafenib.[10]Efforts to overcome the hPXR agonist-induced
chemoresistance have
resulted in a growing list of compounds that have been studied to
determine their capacity to antagonize or inhibit the agonist-activated
hPXR and reduce hPXR target gene expression.[11−14] There have been reported many
structurally diverse hPXR antagonists such as ET-743, ketoconazole,
FLB-12, sulforaphane, coumestrol, camptothecin, A792611, metformin,
and SPA70.[12] However, with the exception
of SPA70, these compounds have been determined to possess characteristics
that render them clinically unusable, such as a lack of in
vivo efficacy and significant toxicities.[12,15]Repurposing FDA-approved drugs has been a promising strategy
in
the treatment of many conditions.[16,17] Interestingly,
many FDA-approved drugs have been proven to possess hPXR antagonistic
and/or inhibitory capabilities that allow for the modulation of hPXR-mediated
gene expression. For example, the diabetes medication metformin and
the chemotherapeutic camptothecin are capable of reducing hPXR target
gene expression.[18,19] However, they do not seem to
interact directly with hPXR, and follow-up studies showing their ability
to overcome chemoresistance mediated by hPXR have yet to be conducted.[18,19] Nevertheless, the rationale behind testing previously approved drugs
for their hPXR antagonistic potential offers several enticing benefits.
Safety, toxicity, and pharmacokinetic (PK) information will already
be established for approved drugs, which will reduce approval time
and associated costs of candidate drugs.[20] Furthermore, if an approved clinical drug was able to antagonize
hPXR at therapeutic concentrations, it would successfully overcome
the primary limiting trait of previous hPXR antagonists, that is,
unacceptable toxicities that exist at the suprapharmacological concentrations
required to antagonize hPXR. Additionally, if an hPXR antagonist was
an approved chemotherapeutic used in combinational therapies, then
we gain the benefits of proven anticancer properties and successful
combinatorial usage. An additional emerging function of hPXR relates
to its ability to perpetuate stemness (e.g., colon
cancer) and cancer regrowth.[21−31] These functions of hPXR in human tumor tissues could be conjointly
inhibited by antagonists.Recently, our lab has demonstrated
that the anticancer drug, belinostat,
could successfully antagonize hPXR-mediated gene expression and attenuate
the hPXR agonist-induced chemotherapy resistance.[13] Based on our previous work, we determined to continue our
screening of a selection of clinically approved drugs that could potentially
be repurposed to antagonize hPXR at therapeutically relevant concentrations.Gefitinib (GEF) (Figure ) is a tyrosine kinase inhibitor approved for the treatment
of non-small-cell lung cancer (NSCLC). GEF has many attractive characteristics
compared to failed hPXR antagonists, which would make it a promising
addition to combination therapy as an hPXR antagonist. These desirable
traits include the reported manageability of its common adverse events
(mild to moderate (grade 1/2) skin rash, diarrhea, and nausea) and
enhancing the benefit of other chemotherapy regimens. In vitro and in vivo studies revealed that GEF can enhance
the anticancer effects of chemotherapy drugs in combination with chemotherapies.[32−34] Patient studies have shown that GEF can effectively be used in combinational
treatments with other chemotherapeutics, such as pemetrexed and carboplatin,
to improve advanced lung adenocarcinoma patient prognosis.[35] Carboplatin was more efficacious when used with
an hPXR antagonist such as ketoconazole in HepG2 hepatocellular carcinoma
cells.[36] Additionally, other clinical trials
were successful in using GEF in combinational treatments. For example,
GEF used in combination with cisplatin and radiotherapy to treat late-stage
III/IV nonmetastatic head and neck squamous cell carcinoma also showed
some success [NCT00229723]. Previously, it was shown that the antitumor
effects of cisplatin can be increased by the hPXR antagonist, leflunomide,[37] and that cisplatin may be a possible agonist
of hPXR,[38] which may help explain why coadministration
with hPXR antagonists, such as GEF and leflunomide, increased cisplatin
antitumor effects.
Figure 1
Chemical structure of gefitinib (GEF).
Chemical structure of gefitinib (GEF).If GEF could serve to antagonize the agonist-induced
hPXR activity,
then it is possible that hPXR target gene expression, including CYP3A4,
could be reduced. However, it is unknown whether GEF antagonizes drug-activated
hPXR target gene expression in humans. In the current study, we show
that GEF, at its Cmax achievable under
therapeutic dosages, can antagonize the agonist-activated hPXR and
reduce the hPXR-mediated expression of CYP3A4 in human hepatocytes.
Mechanistically, molecular modeling and the time-resolved fluorescence
resonance energy transfer (TR-FRET) assays reveal that GEF binds to
hPXR. Based on these characteristics, we propose GEF as a candidate
with the potential to abrogate hPXR-mediated chemotherapy resistance
in combination chemotherapies.
Materials and Methods
Chemicals
Dimethyl sulfoxide (DMSO; ≥99.9%),
rifampicin (RIF; ≥97%), SR12813 (SR; ≥98%), and ketoconazole
(KET; ≥98%) were purchased from Sigma-Aldrich. Gefitinib (GEF);
(≥99%) was purchased from Selleck Chemicals.
Cell Culture
HepG2 human hepatocellular carcinoma cells
were purchased from the American Type Culture Collection (ATCC) and
grown in DMEM (HyClone) supplemented with 10% fetal bovine serum (FBS)
and the other additives (HyClone), as described previously.[39−41] The assay media for HepG2 experiments were comprised of phenol red-free
DMEM supplemented with 5% charcoal/dextran-treated FBS (HyClone).
Cryopreserved human primary hepatocytes were purchased from Corning,
Triangle Research Labs, or Invitrogen. The hepatocyte culture media
were procured from Invitrogen, and the hepatocytes were cultured using
the manufacturer’s specifications altered slightly with our
published protocol.[13,39] The hepatocytes’ donor
information is given in Table . Cryopreserved hepatocells and hepatocells’ media
were purchased from Corning. The hepatocells were cultured using the
manufacturer specifications altered slightly with our published protocol.[13] While the human primary hepatocytes were treated
with the vehicle or drugs for 24 h, the hepatocells were treated with
the vehicle or drugs for 12 h before harvesting the cells for gene
expression studies.
Table 1
Identification Number, Gender, Race,
and Age of the Hepatocyte Donors
identification number
gender
race
age (years)
thermo fisher scientific
Hu8210
male
caucasian
51
Hu8164
male
caucasian
23
triangle research labs
HUM4275B
male
caucasian
29
HUM4122B
male
asian
35
corning
cat. no. 454,551 (lot # 385)
male
caucasian
39
Luciferase Reporter Gene Assays
Luciferase reporter
gene assays were performed in HepG2 cells as previously described.[13,39−41] HepG2 cells were transiently transfected with pcDNA3-hPXR
and pGL3-CYP3A4-luc plasmids using jetPRIME (Polyplus Transfection).
After 24 h transfection, the cells were plated in 96-well assay plates
(PerkinElmer) and treated with DMSO or the compounds for 24 h. A Neolite
Reporter Gene Assay System (PerkinElmer) was used to determine the
luciferase activity using a FLUOstar Optima microplate reader (BMG
Labtech).
Cell Viability Assays
Cell viability assays were performed
in primary hepatocytes and HepG2 cells. The cells were treated with
DMSO or compounds for 24 h before measuring cell viability using CellTiter-Glo
Luminescent Cell Viability Assays (Promega).[13,39−42]
RNA Isolation and Quantitative RT-PCR Analysis
RNA
isolation, reverse transcription, and the quantitative polymerase
chain reaction were performed as previously described.[13] Quality control of RNA was assessed using a
NanoVuePlus Spectrophotometer (GE Healthcare). Transcripts of the
housekeeping genes GAPDH and CYP3A4 were amplified using the gene-specific
primers (Table ).
The comparative ΔΔCt method
was used to analyze the relative gene expression.
Table 2
Forward (F) and Reverse (R) Primers
Used for RT-qPCR of GAPDH and CYP3A4
gene/primer sequence
amplified segment
(bp)
gene bank accession no.
GAPDH
265
NM_002046
F: 5′-ACCACAGTCCATGCCATCAC-3′
R: 5′-GCTTCACCACCTTCTTGATG-3′
CYP3A4
265
NM_017460
F: 5′- TTGGAAGTGGACCCAGAAAC
-3′
R: 5′- CTGGTGTTCTCAGGCACAGA
-3′
Competitive Ligand-Binding Assays
LanthaScreen TR-FRET
hPXR competitive binding assays were performed to examine the binding
affinity of GEF to the hPXR ligand-binding domain (Thermo Fisher Scientific).[13] Briefly, the assays were performed in 384-well
solid black plates with a 10 nM GST–hPXR ligand-binding domain,
40 nM fluorescent-labeled hPXR agonist (Fluomore hPXR Green), 10 nM
terbium-labeled anti-GST antibody, and GEF or SR. The reaction mixtures
were incubated at room temperature in the dark for 1 h, and fluorescent
emissions of each well were measured at 490 and 520 nm using a SpectraMax
iD5 microplate reader (Molecular Devices), and the 520/490TR-FRET
ratio was calculated.
Human hPXR Molecular Docking Studies
Ensemble-based
molecular docking studies were conducted using GOLD suite version
5.5.0 (CCDC, Cambridge, U.K.), as described previously.[13,43,44] GOLD uses a genetic algorithm
(GA) to explore the conformational flexibility of the ligand and receptor
side chains in the binding pocket. Overall, 30 centroid conformations
of apo hPXR generated using an RMSD-based clustering
algorithm, obtained from previous work, were used for the docking.[44] In all of the protein conformations, water and
ions were removed prior to docking. For the docking purpose, a binding
site was defined by considering all atoms within 12 Å from the
geometrical center of the docking site. For each of the 30 independent
GA runs, a maximum number of 200 GA operations were performed. The
docked complexes were ranked with the goldscore and
then rescored using a chemscore fitness function.[43] GEF, KET, and belinostat[13] were docked at multiple sites, whereas SR12813 and RIF
were docked at the ligand-binding pocket (LBP) as controls.[13] The scoring functions account for the hydrogen
bonding, van der Waals (vdW) interactions, and steric complementarity
between the ligand and the receptor. For each ligand, the best-ranked
docked pose with the corresponding chemscore is considered
for further analysis.
Data and Statistical Analysis
Data are shown as mean
values ± standard deviation (SD). Analyses were performed using
GraphPad Prism 9.0 (La Jolla, CA). Significance (P < 0.05, 0.01, 0.001, or 0.0001) was evaluated by ANOVA, followed
by Tukey’s multiple comparison test.
Results
Gefitinib (GEF), at Its Therapeutically Relevant Concentrations,
Inhibits Rifampicin (RIF)-Induced CYP3A4 Gene Expression
In a small-scale preliminary screening approach using hepatocells,[45] we sought to identify clinical drugs with the
capability to modulate hPXR-mediated target gene expression. In total,
29 compounds were selected to form a biased library of commercially
available FDA-approved drugs made up of diverse chemical structures
and used to treat a variety of diseases. Preliminary screening was
performed to determine drug candidates with the potential to inhibit
RIF-induced CYP3A4 gene expression. We identified GEF as a drug candidate
capable of antagonizing the hPXR agonist RIF-induced CYP3A4 gene expression
(Figure A). We, therefore,
hypothesized that GEF, at its therapeutic concentrations, could antagonize
hPXR agonist-induced upregulation CYP3A4 expression in human hepatocytes.
Figure 2
Effect
of GEF on hPXR agonist-induced CYP3A4 gene expression. CYP3A4
mRNA expression in human hepatocells (A) and human primary hepatocytes
(B) after treatment with vehicle DMSO, RIF, GEF ± RIF, or KET
± RIF for 12 h in the hepatocells and 24 h in the hepatocytes.
Results are shown as the fold change over DMSO treatment. Data are
expressed as the mean ± SD values from three to five donor hepatocytes
and three experimental repeats performed on single-lot hepatocells.
*P < 0.05, **P < 0.01, ***P < 0.001, and ****P <0.0001 by ANOVA
with Tukey’s multiple comparison test.
Effect
of GEF on hPXR agonist-induced CYP3A4 gene expression. CYP3A4
mRNA expression in human hepatocells (A) and human primary hepatocytes
(B) after treatment with vehicle DMSO, RIF, GEF ± RIF, or KET
± RIF for 12 h in the hepatocells and 24 h in the hepatocytes.
Results are shown as the fold change over DMSO treatment. Data are
expressed as the mean ± SD values from three to five donor hepatocytes
and three experimental repeats performed on single-lot hepatocells.
*P < 0.05, **P < 0.01, ***P < 0.001, and ****P <0.0001 by ANOVA
with Tukey’s multiple comparison test.To determine the experimental concentrations of
GEF that are therapeutically
relevant, we have collected the pertinent plasma pharmacokinetic parameters
from previous studies in humans (Table ). In humans, after a single oral dose of GEF at the
recommended dosage of 250 mg,[46] the mean
peak plasma concentration (Cmax) of GEF
could reach 0.84 (0.37–1.75) μM.[47−50] The FDA treatment regimen for
relevant NSCLC is a daily oral dosage of GEF 250 mg once daily until
disease progression or unacceptable toxicity. However, in combination
with certain medications such as carboplatin and paclitaxel, 500 mg
daily can be given.[46,51] Plasma concentrations of GEF
will increase to ∼2 μM when using dosages in the 500
mg range.[48] However, dosages of up to 1500–3500
mg can be given without causing significant adverse events,[46,52] so the usage of higher concentrations is also feasible. GEF plasma
concentrations have been measured with dosages of 700 mg/mL daily
at 2.6 μM.[46] For our study, GEF concentrations
(1, 3, 10 μM) were chosen based on previous PK ranges, as well
as the commonly used experimental concentrations. We, therefore, examined
the effect of GEF, at its Cmax achievable
under therapeutic dosages, on agonist-induced endogenous hPXR target
gene expression in human hepatocytes.
Table 3
Published Plasma Pharmacokinetic Parameters
of GEF in Human Beings
human subjects’ disease state and experimental
design
dosage of GEF
Cmax μM
Tmax (h)
T1/2 (h)
AUC(0–t) (μg·h/mL)
reference
patients with non-small-cell lung, adenocarcinoma,
squamous, poorly differentiated adenocarcinoma, colorectal, head and
neck, and breast cancer were given a single oral dose of 225 mg for 1 day (1)a or a single oral dose of 225, 400, 525, or 700
mg daily for 14 days (14)a
(1)a 225 mg (oral)
0.34
4 (3–12)
30
4.4
(48)
(14)a 225 mg (oral)
0.76
5 (3–7)
40
11.6
(14)a 400 mg (oral)
1.75
3 (3–7)
45
25.5
(14)a 525 mg (oral)
1.90
5 (3–7)
59
36.5
(14)a 700 mg (oral)
2.59
5 (3–7)
55
48.2 (0–24 h)
Healthy humans were given a single oral dose of 250 or 500 mg for 1 day (1)
(1) 250 mg (oral)
0.18 (0.10–0.42)
5 (3–8)
31.5 (9.6–62.1)
2.4 (0.89–6.55)
(49)
(1) 500 mg (oral)
0.45 (0.20–1.19)
3 (3–7)
31.3 (9.8–74.5)
5.9 (2.11–13.09) (0–24 h)
Patients with advanced solid tumors of
the colon/rectum, lung,
stomach, ovary, liver, pancreas, and kidney were given a single oral
dose of 250 mg for 1 day (1)a
(1)a 250 mg (oral)
0.35 (0.10–0.72)
3 (1–8)
50.5 (15.6–111)
4.87 (1.86–10.0) (0–24 h)
(49)
Healthy human subjects were given a single
oral dose of 250 mg for 1 day (1)a
(1)a 250 mg (oral)
0.29 (0.11–0.55)
5 (3–24)
26.9 (20.0–45.6)
8.61 (3.87–20.41) (0–24 h)
(47)
Patients with advanced non-small-cell lung cancer were given
a single oral dose of 250 mg for 1 day (1)a
(1)a 250 mg (oral)
0.84 (0.37–1.75)
na
na
10.95 (1.56–31.31)
(50)
Number in the parenthesis represents
the number of days the human subjects were given a single dose of
GEF.
Number in the parenthesis represents
the number of days the human subjects were given a single dose of
GEF.Ketoconazole (KET), a known antagonist of hPXR,[53] inhibited the hPXR agonist RIF-induced CYP3A4
mRNA expression
in human primary hepatocytes (Figure B). Similarly, therapeutically relevant concentrations
of GEF repressed RIF-induced CYP3A4 mRNA levels in human primary hepatocytes
(Figure B). These
results suggest that GEF can antagonize hPXR agonist-induced CYP3A4
gene expression at its Cmax achievable under therapeutic
dosages in human primary hepatocytes (Figure A,B).
GEF Antagonizes RIF Induction of hPXR-Mediated CYP3A4 Promoter
Activity
To determine whether GEF could effectively inhibit
the agonist-activated hPXR transcriptional activity, we examined the
effect of GEF on hPXR-regulated CYP3A4 promoter activity in human
HepG2 cells (Figure ). The cells were transiently transfected with CYP3A4-luc and hPXR
and treated with DMSO, RIF, GEF ± RIF, or KET ± RIF. KET
decreased RIF-induced hPXR-mediated transactivation of CYP3A4 promoter
activity (Figure ).
Although not as strongly as the known hPXR antagonist KET, GEF, at
its therapeutically relevant concentrations, was able to significantly
inhibit RIF-induced hPXR-mediated transactivation of CYP3A4 promoter
activity (Figure ).
These results suggest that GEF can antagonize the agonist-activated
hPXR.
Figure 3
Effect of GEF on hPXR-mediated CYP3A4 promoter activity. HepG2
cells were transiently cotransfected with pcDNA3-hPXR and pGL3-CYP3A4-luc
plasmids and treated with DMSO, GEF, RIF, or GEF ± RIF. CYP3A4
promoter activity was measured 24 h after the treatments. The luciferase
activity was normalized to the number of live cells, and the data
of three experimental repeats are expressed as a fold induction ±
SD over DMSO treatment. Differences were tested using one-way ANOVA
with Tukey’s post hoc test. *P < 0.05,
**P < 0.01, ***P < 0.001,
and ****P < 0.0001.
Effect of GEF on hPXR-mediated CYP3A4 promoter activity. HepG2
cells were transiently cotransfected with pcDNA3-hPXR and pGL3-CYP3A4-luc
plasmids and treated with DMSO, GEF, RIF, or GEF ± RIF. CYP3A4
promoter activity was measured 24 h after the treatments. The luciferase
activity was normalized to the number of live cells, and the data
of three experimental repeats are expressed as a fold induction ±
SD over DMSO treatment. Differences were tested using one-way ANOVA
with Tukey’s post hoc test. *P < 0.05,
**P < 0.01, ***P < 0.001,
and ****P < 0.0001.
GEF is Moderately Cytotoxic at Concentrations Effective for
Inhibiting RIF Induction
In CellTiter-Glo Luminescent cell
viability assays, while 1 and 3 μM alone did not exert noticeable
cytotoxicity in the human primary hepatocytes (Figure A) or HepG2 cells (Figure B), 10 μM GEF was significantly cytotoxic
(Figure A,B). In combination
with RIF, 10 μM GEF was modestly cytotoxic to the human primary
hepatocytes (Figure A). RIF by itself was cytotoxic to HepG2 cells (Figure B). Similarly, RIF in combination
with GEF (1, 3, or 10 μM) was also modestly cytotoxic to HepG2
cells (Figure B).
Collectively, these data suggest that GEF can antagonize RIF-induced
hPXR target gene expression at its Cmax achievable under therapeutic dosages, with modest cytotoxicity.
Figure 4
Effect
of GEF on the viability of the human primary hepatocytes
and HepG2 cells. The viability of the human primary hepatocytes (A)
and HepG2 cells (B) was determined under the same experimental conditions
indicated in gene expression studies. The viability of DMSO-treated
cells was expressed as 100%. Results are presented as the mean ±
S.D. *P < 0.05, **P < 0.01,
***P < 0.001, and ****P <
0.0001 by ANOVA and Tukey’s multiple comparison test.
Effect
of GEF on the viability of the human primary hepatocytes
and HepG2 cells. The viability of the human primary hepatocytes (A)
and HepG2 cells (B) was determined under the same experimental conditions
indicated in gene expression studies. The viability of DMSO-treated
cells was expressed as 100%. Results are presented as the mean ±
S.D. *P < 0.05, **P < 0.01,
***P < 0.001, and ****P <
0.0001 by ANOVA and Tukey’s multiple comparison test.
Molecular Docking Studies Predict that GEF Could Bind to Multiple
Sites at hPXR
Several mechanisms could contribute to the
GEF inhibition of RIF-induced CYP3A4 gene expression, including GEF
binding to hPXR at multiple functionally important sites. The docking
score from ensemble-based docking studies predicted that GEF could
bind to the LBP, AF2 region, and α8 pocket of hPXR (Figure A). At the LBP, GEF
possesses different binding predicted modes (Figure B), with the docking score comparable to
that of known hPXR LBP-binding compounds, RIF, SR12812, and belinostat,[13] suggesting that GEF could act as an agonist/antagonist
by direct interaction with the hPXR LBP. Similar to KET and belinostat,[13] known hPXR antagonists, GEF was predicted to
bind to the AF2 region, which was reflected in their docking score
(Figure A). GEF was
predicted to interact with residues at the AF2 region that are essential
for SRC-1 interaction,[54] potentially hindering
the binding of the coactivator SRC-1 peptide (Figure C,D). It is interesting to compare GEF binding
to hPXR with that of our previously published antagonist, belinostat.[13] Primarily, GEF with a rigid bicyclic ring is
constrained in its conformational space (Figure ). On the other hand, belinostat with monocyclic
rings is more flexible and has the capacity to form strong hydrogen
bonds with the terminal N=O group and with the SO2 group on the other end of the molecule, which is easily accessible
to the polar/charged groups of PXR groups (Figure in (13)). Thus, belinostat interaction at the AF2 site is more
dominated by hydrogen bonds and that of GEF is dominated by hydrophobic
interactions, resulting in a slightly higher docking score of belinostat.
This feature is also evident in interactions at the α8 site
(Figure C). It is
interesting to note that the predicted binding of GEF at the AF2 site
is remarkably similar to that of BEL, in spite of the differences
in their chemical features. As in the case of BEL, K259 of α3
hydrogen bonds with the oxygen atom attached to a bicyclic ring of
GEF (Figure C,D),
anchoring one side of SRC-1 binding site (Figure D). Collectively, the docking study results
suggest that GEF could exert its antagonistic activity either by directly
binding to the LBP and/or by allosterically interacting with the AF2
and/or α8 pocket.
Figure 5
hPXR molecular docking studies. (A) Computational
modeling with
ensemble-based molecular docking studies predicts that GEF could bind
to the multiple distinct sites of hPXR. The score of the top-ranked
docked pose of ligands at different sites in hPXR was obtained from
docking of ligands against an ensemble of hPXR conformations. (B)
(a–c) Top three ranked docked poses of GEF at LBP of hPXR,
with the corresponding docking score. Dotted lines denote the H-bonding
interaction, and the protein residues involved in hydrophobic interactions
are shown by red spikes. The H-bond distance is also shown alongside.
(C) Mode of the interaction of GEF at (a) AF2 region as well as (b)
α8 pocket. Dotted lines indicate the H-bonding interaction,
and red spikes indicate the protein residues involved in hydrophobic
interactions. The amino acids that are crucial for the interaction
of SRC-1 at the AF2 region are displayed in a rectangle. (D) Superposition
of SRC-1 and GEF interaction at the hPXR AF2 region. The interacting
amino acids common to both GEF and SRC-1 are highlighted.
hPXR molecular docking studies. (A) Computational
modeling with
ensemble-based molecular docking studies predicts that GEF could bind
to the multiple distinct sites of hPXR. The score of the top-ranked
docked pose of ligands at different sites in hPXR was obtained from
docking of ligands against an ensemble of hPXR conformations. (B)
(a–c) Top three ranked docked poses of GEF at LBP of hPXR,
with the corresponding docking score. Dotted lines denote the H-bonding
interaction, and the protein residues involved in hydrophobic interactions
are shown by red spikes. The H-bond distance is also shown alongside.
(C) Mode of the interaction of GEF at (a) AF2 region as well as (b)
α8 pocket. Dotted lines indicate the H-bonding interaction,
and red spikes indicate the protein residues involved in hydrophobic
interactions. The amino acids that are crucial for the interaction
of SRC-1 at the AF2 region are displayed in a rectangle. (D) Superposition
of SRC-1 and GEF interaction at the hPXR AF2 region. The interacting
amino acids common to both GEF and SRC-1 are highlighted.
GEF Binds to the Ligand-Binding Domain (LBD) of hPXR
Computational molecular modeling docking studies predicted that GEF
could bind to the ligand-binding domain of hPXR (Figure ). Using a cell-free hPXR ligand-binding
assay, we tested whether GEF could bind to the ligand-binding domain
of hPXR at its Cmax achievable under therapeutic
dosages. The hPXR agonist SR12813 exhibited successful binding to
the LBD of hPXR (Figure ). Similarly, GEF was capable of binding to the LBD of hPXR (Figure ). The ability of
GEF to bind the LBD of hPXR suggests the potential of GEF to act as
a direct antagonist.
Figure 6
GEF binds to the hPXR-LBD in the competitive ligand-binding
assay.
hPXR-LBD, a fluorescein-labeled hPXR ligand tracer, and Tb-anti-GST
antibody were incubated in the presence of the vehicle control (DMSO),
a test compound (GEF), or a known hPXR agonist SR12813 (SR). The TR-FRET
ratio denotes the binding of the fluorescein-labeled hPXR ligand tracer
to the hPXR-LBD, and a reduction of the TR-FRET ratio denotes the
binding of antagonists or agonists to the hPXR-LBD by outcompeting
the binding of the fluorescein-labeled hPXR ligand tracer. Data are
presented as mean ± SD values from three experiments. *P < 0.05, **P < 0.01, ***P < 0.001, and ****P < 0.0001 by
ANOVA with Tukey’s multiple comparison test.
GEF binds to the hPXR-LBD in the competitive ligand-binding
assay.
hPXR-LBD, a fluorescein-labeled hPXR ligand tracer, and Tb-anti-GST
antibody were incubated in the presence of the vehicle control (DMSO),
a test compound (GEF), or a known hPXR agonist SR12813 (SR). The TR-FRET
ratio denotes the binding of the fluorescein-labeled hPXR ligand tracer
to the hPXR-LBD, and a reduction of the TR-FRET ratio denotes the
binding of antagonists or agonists to the hPXR-LBD by outcompeting
the binding of the fluorescein-labeled hPXR ligand tracer. Data are
presented as mean ± SD values from three experiments. *P < 0.05, **P < 0.01, ***P < 0.001, and ****P < 0.0001 by
ANOVA with Tukey’s multiple comparison test.
Discussion
Our results show for the first time that
gefitinib (GEF) antagonizes
the hPXR agonist-induced CYP3A4 gene expression in human hepatocytes
at its clinically relevant therapeutic concentrations. Many of the
known hPXR antagonists are inadequate for clinical utility as they
are unable to achieve the concentrations required to modulate hPXR in vivo without causing unacceptable toxicity.[11,55] For example, the required concentration of KET needed to inhibit
hPXR is 10–25 μM, which is unlikely to be achieved safely.
Similarly, sulforaphane effectively antagonized hPXR in in
vitro studies, but concentrations needed for sulforaphane
to antagonize hPXR could not be achieved in vivo.[56] Recently, a novel hPXR antagonist has been identified.
However, the pharmacokinetics and safety profile of this compound
in humans are unknown.[15] GEF is a clinically
used anticancer drug with validated pharmacokinetics and safety profile.
While adverse events resulting from the therapeutic use of GEF have
been described, these were mild to moderate (grade 1/2) skin rash,
diarrhea, and nausea. These were further determined to be manageable
and noncumulative.[57] Therefore, GEF may
have the potential to be used to antagonize hPXR as an adjuvant therapy
with manageable adverse events at its relevant therapeutic concentrations.While GEF inhibits EGFR with an inhibitory concentration (IC50) of 2.12 ± 0.25 nM in cell-free assays,[58] it is expected to inhibit EGFR at its in vivo therapeutic concentration (0.3 to 3 μM).[47−50] It is important to note that although the effective in vivo therapeutic concentration may go up to 3 μM, the maximum Cmax reported at more typical dosing ranges of
250–500 mg is 2 μM. However, increasing the dosage to
700 mg in patients has increased the Cmax to 2.7 μM. It may be possible to increase the dosage to increase Cmax to 3 μM, as additional patient studies
have shown that dosages up to 3500 mg are possible without significant
toxicity.[46,52] Further studies are needed to determine
the feasibility of using higher dosages of GEF. Our studies show that
GEF can also antagonize hPXR at its therapeutically relevant concentration
of 1 μM, with increasing effectiveness at potentially achievable
concentrations of 3 μM. Although higher therapeutic concentrations
of GEF may be possible, the feasibility and safety of using higher
dosages of GEF to achieve a sustainably higher therapeutic concentration
require future studies. Computational molecular docking predictions
reveal that GEF likely interacts with hPXR at multiple sites, including
the ligand-binding pocket, α8 pocket, and AF2 regions of hPXR.
Cell-free LBD binding assays confirmed that GEF acts as an antagonist
by binding to the LBD of hPXR (Figure ). GEF may also inhibit the agonist-activated hPXR via allosteric interaction with the binding to the AF2 region
as well as the α8 pocket of hPXR. However, the potential allosteric
binding of GEF to the AF2 region and the α8 pocket of hPXR has
not been investigated.The net effect of GEF may vary by tissue
and cancer type. hPXR
activity has previously been shown to be regulated in a tissue-specific
and context-dependent manner.[27,59] Indeed, in LS180 human
colon cancer cells, GEF appears to activate hPXR and induce hPXR-mediated
MDR1 gene expression.[60] However, CYP3A4
expression was not evaluated in this study. Furthermore, as hPXR and
its coregulators are also expressed differentially in a tissue-specific
manner,[59] a compound such as GEF, capable
of inhibiting the interaction between hPXR and its coactivators, may
only be effective in some cancer types and moreover so in a context-dependent
manner. hPXR is known to be regulated in a promoter and ligand-dependent
manner, thereby different ligands can influence hPXR to bind to different
response elements and influence different genes.[61] Indeed, differing ligands were shown to result in PXR binding
to different promoters, resulting in ligand-dependent promoter activity
of CYP3A4 and MDR1 (P-gp). This is, in part, due to different ligand
structures having unique hPXR ligand-binding conformations, resulting
in differential interaction with hPXR cofactors,[61] which may explain any differential effects of GEF compared
to other TKIs. Furthermore, hPXR modulation by the same drug can have
differential effects in the same tissue type depending on the disease
state.[27] In liver hepatocellular carcinoma
HepG2 cells, a known hPXR agonist buprenorphine, increased hPXR-mediated
gene expression. However, the same study revealed that exposure of
noncancerous human primary hepatocytes to buprenorphine resulted in
no induction of hPXR-mediated gene expression.[62] It is therefore possible that GEF may modulate hPXR differentially
depending on tissue or scenario in a context-dependent manner.Our previous work has demonstrated that it is possible to overcome
hPXR agonist-mediated chemoresistance by repurposing a clinical anticancer
drug to antagonize the agonist-activated hPXR at therapeutic concentrations
during combination chemotherapy.[13] Based
on the ability of GEF to antagonize the RIF-activated hPXR-mediated
upregulation of CYP3A4, it is feasible to use GEF to overcome chemoresistance
in some cases; however, this remains to be studied. Our hypothesis
would be relevant only to cancers in which chemoresistance occurs
because of drug activation of hPXR-mediated overexpression of CYP3A4.[27,63,64]In conclusion, our results
show that GEF, at its Cmax achievable
under therapeutic dosages, can antagonize
the RIF-activated hPXR target CYP3A4 gene expression in human hepatocytes.
Thus, GEF could serve as a novel candidate for use in precision combinational
chemotherapies to combat hPXR-mediated chemoresistance in relevant
cancers where the hPXR agonist-induced upregulation of CYP3A4 contributes
to chemotherapy resistance.
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