| Literature DB >> 36175835 |
Jinyoung Moon1,2, Hwan-Cheol Kim3,4.
Abstract
INTRODUCTION: By substituting the general 'susceptibility factor' concept for the conventional 'gene' concept in the case-only approach for gene-environment interaction, the case-only approach can also be used in environmental epidemiology. Under the independence between the susceptibility factor and environmental exposure, the case-only approach can provide a more precise estimate of an interaction effect.Entities:
Keywords: Case-only approach; Environmental epidemiology; Environmental exposure; Independence assumption; Interaction effect; National Health and Nutritional Examination Survey; Susceptibility factor
Mesh:
Substances:
Year: 2022 PMID: 36175835 PMCID: PMC9520813 DOI: 10.1186/s12874-022-01706-6
Source DB: PubMed Journal: BMC Med Res Methodol ISSN: 1471-2288 Impact factor: 4.612
Abbreviations
| Abbreviations | Definition | Equation |
|---|---|---|
| RR | Relative Risk | |
| OR | Odds Ratio | |
| S | Susceptibility factor | |
| E | Environmental exposure | |
| ICRc/nc | The interaction contrast ratio (ICR) in a study with cases and non-cases | |
| ICRcc | The ICR in a case-control study | |
| ICRco | The ICR in a case-only study | |
| S-E ORc/nc | Susceptibility factor-Environmental exposure odds ratio in a study with cases and non-cases | S-E ORc/nc = |
| S-E ORcontrol | Susceptibility factor-Environmental exposure odds ratio in the control population | S-E ORcontrol |
An example of a study with cases and non-cases
| Environment (E) | Susceptibility (S) | Disease | No disease | Total | Relative Risk (RR) | Odds Ratio (OR) |
|---|---|---|---|---|---|---|
| – | – | a | B | a + B | 1.0 (ref) | 1.0 (reference) |
| – | + | c | D | c + D | RRs= | ORs= |
| + | – | e | F | e + F | RRe= | ORe= |
| + | + | g | H | g + H | RRse= | ORse= |
Under additive scale: ICRc/nc = RRse-(RRs + RRe-1), ICRc/nc = ORse-(ORs + ORe-1)
Under multiplicative scale: ICRc/nc = RRse/(RRs × RRe), ICRc/nc = ORse/(ORs × ORe)
An example of a case-only study
| Susceptibility (S) | |||
|---|---|---|---|
| – | + | ||
| Environment (E) | a | c | |
| e | g | ||
A case-control study data generated from a population with cases and non-cases
| Environment (E) | Susceptibility (S) | Case | Control | Odds Ratio (OR) |
|---|---|---|---|---|
| – | – | a | b = pB | 1.0 (ref) |
| – | + | c | d = pD | ORs= |
| + | – | e | f = pF | ORe= |
| + | + | g | h = pH | ORse= |
Descriptive analysis for each variable used
| The preventive (negative) interaction effect between blood chromium levels and glycohemoglobin levels on albuminuria (micro and macro) | ||||
| Environmental exposure | Normal chromium | Abnormal chromium | NA | |
| Number of subjects | 1312 | 29 | 55 | |
| Mean | 0.35 μg/L | 2.02 μg/L | NA | |
| Outcome (disease) | No albuminuria | Albuminuria | NA | |
| Number of subjects | 1089 | 270 | 37 | |
| Mean | 9.49 mg/g | 504.0 mg/g | NA | |
| Susceptibility factor | Blood glycohemoglobin level (with 48 NA values) | |||
| Statistics | Min | Median | Mean | Max |
| Value | 4.1% | 6.0% | 6.39% | 16.5% |
| The aggravating (positive) interaction effect between blood cobalt levels and old ages on albuminuria (micro and macro) | ||||
| Environmental exposure | Normal cobalt | Abnormal cobalt | NA | |
| Number of subjects | 6942 | 32 | 312 | |
| Mean | 0.18 μg/L | 6.04 μg/L | NA | |
| Outcome (disease) | No albuminuria | Albuminuria | NA | |
| Number of subjects | 5919 | 1179 | 188 | |
| Mean | 9.28 mg/g | 335.0 mg/g | NA | |
| Susceptibility factor | Age in years (with no NA value) | |||
| Statistics | Min | Median | Mean | Max |
| Value | 40.0 yrs | 60.0 yrs | 60.28 yrs | 80.0 yrs |
NA not available (missing value), yrs years of age
The application of the case-only approach for the first and second example
| Table 6-1. The application of the case-only approach for the preventive (negative) interaction effect between blood chromium levels and glycohemoglobin levels on albuminuria (micro and macro) | |
logit P(D = 1) = β0 + β2’E OR for 1 unit difference of environmental exposure = exp.(β2’) | |
| OR for a 1 μg/L difference of blood chromium level: 2.20 (95% CI 1.48–3.32) | Effect estimate |
| When a 1 μg/L of blood chromium level (μg/L) differs, the fold-difference in the odds of albuminuria is 2.20 (95% CI 1.48–3.32) times. | Explanation |
logit P(D = 1) = β0 + β1’S OR for 1 unit difference of susceptibility factor = exp.(β1’) | |
| OR for 1% difference of glycohemoglobin level: 1.57 (95% CI 1.44–1.73) | Effect estimate |
| When a 1% of blood glycohemoglobin level differs, the fold-difference in the odds of albuminuria is 1.57 (95% CI 1.44–1.73) times. | Explanation |
logit P(D = 1) = β0 + β1S + β2E + β3SE ICRc/nc = exp.(β3) | Eq. ( Eq. ( |
| ICRc/nc: 0.72 (95% CI 0.35–1.60) | Effect estimate |
| When a 1 μg/L of both blood chromium level and 1% of blood glycohemoglobin level coincide, the multiplicative ICR is 0.72 (95% CI 0.35–1.60), with statistical insignificance. | Explanation |
logit P(S = 1) = η0 + η1E S-E ORc/nc = exp.(η1) | Eq. ( Eq. ( |
| S-E ORc/nc: 0.76 (95% CI 0.47–1.06) | Effect estimate |
| In the the population with cases and non-cases, blood chromium levels and blood glycohemoglobin levels are independent. Therefore, the case-only ICR can be a good substitute for the ICR acquired from the population with cases and non-cases. | Explanation |
logit P(S = 1) = γ0 + γ1E ICRCO = exp.(γ1) | Eq. ( Eq. ( |
| ICRCO: 0.59 (95% CI 0.28–0.95) | Effect estimate |
| When only the cases are analyzed (case-only approach), the case-only ICR is 0.59 (95% CI 0.28–0.95), with a statistical significance (a negative interaction effect). | Explanation |
| Table 6-2. The application of the case-only approach for the aggravating (positive) interaction effect between blood cobalt levels and old ages on albuminuria (micro and macro) | |
logit P(D = 1) = β0 + β2’E OR for 1 unit difference of environmental exposure = exp.(β2’) | |
| OR for 1 μg/L difference of blood cobalt level: 1.09 (95% CI 0.98–1.20) | Effect estimate |
| When a 1 μg/L of blood cobalt level (μg/L) differs, the fold-difference in the odds of albuminuria is 1.09 (95% CI 1.31–1.57) times. | Explanation |
logit P(D = 1) = β0 + β1’S OR for 1 unit difference of susceptibility factor = exp.(β1’) | |
| OR for a 1-year difference of age: 1.05 (95% CI 1.04–1.05) | Effect estimate |
| When 1-year in age differs, the fold-difference in the odds of albuminuria is 1.05 (95% CI 1.04–1.05) times. | Explanation |
logit P(D = 1) = β0 + β1S + β2E + β3SE ICRc/nc = exp.(β3) | Eq. ( Eq. ( |
| ICRc/nc: 1.13 (95% CI 0.99–1.37) | Effect estimate |
| When a 1 μg/L difference of both blood cobalt level and 1-year difference of age coincide, the multiplicative ICR is 1.13 (95% CI 0.99–1.37), with statistical insignificance. | Explanation |
logit P(S = 1) = η0 + η1E S-E ORc/nc = exp.(η1) | Eq. ( Eq. ( |
| S-E ORc/nc: 1.06 (95% CI 1.03–1.10) | Effect estimate |
| In the a population with cases and non-cases, blood cobalt level and age in years show a slight association (not completely independent). Therefore, the case-only ICR must be multiplied by the S-E ORc/nc to be ICRc/nc according to Eq. ( | Explanation |
logit P(S = 1) = γ0 + γ1E ICRCO = exp.(γ1) | Eq. ( Eq. ( |
| ICRCO: 1.14 (95% CI 1.03–1.37) | Effect estimate |
| When only the cases were analyzed (case-only approach), the case-only ICR was 1.14 (1.03–1.37), with a statistical significance (a positive interaction effect). | Explanation |
| Eq. ( | |
| ICRCO: 1.14 (1.03–1.37) × S-E ORc/nc: 1.06 (95% CI 1.03–1.10) | |
| ICRc/nc: 1.21 (95% CI 1.06–1.51) | Effect estimate |
| The ICRCO multiplied by the S-E ORc/nc produced the ICRc/nc of 1.21 (95% CI 1.06–1.51). | Explanation |